Gene Ksed_21770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21770 
Symbol 
ID8373681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2254141 
End bp2255772 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content68% 
IMG OID644992421 
Productchaperonin GroL 
Protein accessionYP_003149927 
Protein GI256825967 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0126333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.154597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA CCATTGCGTT CAACGAGGAG GCCCGCCGCG GCCTCGAGCG CGGCATGAAC 
ACCCTTGCCG ACGCCGTGAA GGTGACGCTC GGCCCCAAGG GCCGCAACGT CGTGCTGGAG
AAGAAGTGGG GCGCCCCCAC CATCACCAAC GACGGTGTCT CCATCGCCAA GGAGATCGAG
CTCGACGAGC CCTACGAGCA CATTGGTGCC GAGCTCGTGA AGGAGGTCGC CAAGAAGACC
GACGACGTCG CCGGTGACGG TACGACGACG GCGACCGTCC TGGCCCAGGC GATGGTCCGC
GAGGGCCTGC GCAACGTGGC CGCCGGCGCC AACCCGATGG GGCTGAAGCG CGGCATCGAG
CAGGCCACCA AGGCCGTGTC CGACGAGCTG CTGAACATGG CCAAGGACAT CGACACCAAG
GACCAGATCG CCTCCACCGC GTCCATCTCG GCCGCGGACC CGGAGATCGG CCAGGTCATC
GCCGAGGCGA TGGACAAGGT CGGCAAGGAG GGCGTGATCA CGGTCGAGGA GAGCAACACC
TTCGGCATCG AGCTCGAGCT CACCGAGGGC ATGCGCTTCG ACAAGGGCTA CATCTCCCCG
TACTTCGTCA CCGACACCGA CCGCATGGAG GCGGTGTTCG AGGACCCGTA CATCCTGCTG
GTGAACTCGA AGATCGGCGC CATCAAGGAC CTGCTGCCGC TGCTGGAGAA GGTCATGCAG
TCCGGCAAGC CGCTGGTGAT CATCGCCGAG GACGTCGAGG CCGAGGCCCT GGCGACCCTG
ATCGTCAACA AGGTGCGCGG CAACTTCAAG TCCGTCGCCG TGAAGTCCCC GGGCTTCGGT
GACCGTCGCA AGGCGATGCT GGGCGACATG GCCATCCTCA CCGGTGGCCA GGTCATCTCC
GAGGAGGTCG GCCTGACCCT GGAGAACGCC GAGCTCGACA TGCTGGGCAC CGCCCGCAAG
GTCGTCGTCA CCAAGGACGA GACCACCATC GTGGACGGCG CCGGCGACGA CGCCCAGGTG
CAGGGTCGCG TGAACCAGAT CCGCGCCGAG ATCGAGAACT CGGACTCGGA CTACGACCGC
GAGAAGCTGC AGGAGCGCCT CGCCAAGCTG GCCGGCGGCG TGGCCGTCAT CAAGGCCGGT
GCGGCCACCG AGGTGGAGCT CAAGGAGCGC AAGCACCGCA TCGAGGACGC CGTGCGCAAC
GCCAAGGCCG CCGTCGAGGA GGGCATCGTC GCCGGTGGTG GCGTGGCCCT GCTGCAGGCC
GCCACCAAGG CGTTCGAGTC CCTGAAGCTC GAGGGCGACG AGGCCACCGG TGCCGAGATC
GTCCGCGTGG CCTCCAGCGC TCCGCTGAAG CAGATCGCCA TCAACGCCGG TCTCGAGGGC
GGCGTCGTGG CCGAGAAGGT GCGCGGCCTC AAGCCCGGCG AGGGCCTGAA CGCGGCCACC
GGCGAGTACG TCGACATGAT CGCCGAGGGC ATCATCGACC CGGCCAAGGT GACCCGTTCC
GCGCTGCAGA ACGCGGCCTC CATCGCCGCG CTGTTCCTCA CCACCGAGGC GATCGTGGCC
GAGAAGCCCG ACAACAGCAG CAACAACGCT GGCGGCGGCG ACATGGGCGA CATGGGCGGC
ATGGGCTTCT GA
 
Protein sequence
MAKTIAFNEE ARRGLERGMN TLADAVKVTL GPKGRNVVLE KKWGAPTITN DGVSIAKEIE 
LDEPYEHIGA ELVKEVAKKT DDVAGDGTTT ATVLAQAMVR EGLRNVAAGA NPMGLKRGIE
QATKAVSDEL LNMAKDIDTK DQIASTASIS AADPEIGQVI AEAMDKVGKE GVITVEESNT
FGIELELTEG MRFDKGYISP YFVTDTDRME AVFEDPYILL VNSKIGAIKD LLPLLEKVMQ
SGKPLVIIAE DVEAEALATL IVNKVRGNFK SVAVKSPGFG DRRKAMLGDM AILTGGQVIS
EEVGLTLENA ELDMLGTARK VVVTKDETTI VDGAGDDAQV QGRVNQIRAE IENSDSDYDR
EKLQERLAKL AGGVAVIKAG AATEVELKER KHRIEDAVRN AKAAVEEGIV AGGGVALLQA
ATKAFESLKL EGDEATGAEI VRVASSAPLK QIAINAGLEG GVVAEKVRGL KPGEGLNAAT
GEYVDMIAEG IIDPAKVTRS ALQNAASIAA LFLTTEAIVA EKPDNSSNNA GGGDMGDMGG
MGF