Gene Ksed_21530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21530 
Symbol 
ID8373657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2227589 
End bp2229928 
Gene Length2340 bp 
Protein Length779 aa 
Translation table11 
GC content79% 
IMG OID644992399 
Producthypothetical protein 
Protein accessionYP_003149905 
Protein GI256825945 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.636597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000150797 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCCTC CCTCGACACC CGGTGGCGGC TTCCGCTCCC TGGCCGCAGA CCTGCGAGGC 
CGGAGTGTCG ACGAACTGGC CGACCTCCTG CTCGCCCGGC CCGACCTCGC ACGCCACTCC
GTGGAGGACC TCTCCGCCCT GGCGGCGGCG GCCACCACGA CCACGTCCAC CACCCGCGCC
CTGGACTCCC TGGACCGCCC CACGCTGCAG GTGCTCGAGG CCGCCCTGGT GCTGGCCCCC
ACCGGCGCCG ACGAGGTGGC CCGCGCCGTC GACGCCCCGC TGCGCGAGGT GACCTCCCGA
CTCGACCGGC TGTGGACGGC CGCCCTGCTG TGGCGCAGCC CGGAGGGCCT GCGCCCCGTG
CGGATCCTCT CCGAGCTCCT GCCCTCCCCC GCCGGCCTCG CGCCGGCCAG CGAGGCGGGG
GCCCCCGGGG CCGCCCCCGC CGCGACCGGC CCGTCGCTGA AGGACCAGCT CGCCACCGTG
TCCGATGCGG GCAGCGCCCT CCTGCGAGCC CTCACCTGGG GGCCCGGCGT GGGCACCGTG
ACGGCCAGCG CGCCGGCCGC CACCCAGGAG GCCCGGCGGG AGCTGGTGGC CGCCGGGCTG
CTGGTGGACC GGTCGGCCAC CACGGTCCAG CTGCCGCGCG AGGTGGCGCT CGCCCTGCGC
CAGGGCCGCA CGCACCGCTC CCTCGACGTG GAACCACCCG CCCCCGAGAC CGGCGCGGCC
CGCCGGGACG CGCCGTTGGT GGACGCCGCC GCGGCCGAGA CCTCGGGGCT GCTTTCCCTC
ACCGACGAGC TGCTGCTGAC CCTGGAGGTC CACCCGCCGG CCGTGCTGGC CAACGGCGGC
CTCGGCGTCC GGGAGGTGAC GGCCGTCGAG CGGCGCCTGG GCATCGACGC CCCCGCCGCG
CACCTGCTGC TGACGGTGGC GCACGCCGCC GGGCTCATGG AGGTCGGGGC TTGGCCGGGG
GCAAGCGACG GGCACCGTTG GGGCCCCACG CCGGCCGCCG ACCGCTGGCA GCAGCTCCCT
GACCCCGAAC GCGCCGCGCA GTTGTTGGAC GCCTGGTGGT CCACGCCGCT CGACCCCGAC
GCCACCGGCA CCACCGCGCC CCCCGGCCGG CGCGCCGGCG CGCGCACGGG CCCGGCTCCG
GACGCCGGTT CCGGCCGGTC GAAGCGCGTC AACGCCCTGT CGGAGGCCGC GTCCTCCCCC
ACTGCCCGGC ACCGCCGGCA GGAGCTGCTG GGCGAGCTCG CCGCCCTGGG CGAGGAGTCC
GGCACCGTCG AGGAGCTCCT CGCCCGCTGG GCCTGGCGCC ACCCGCTGCG CCGTCCGCCC
GCACCGGAGG CCGTGGCCGG GGTCCTGGAG CAGGCGCGCC TGCTGGGCCT GGCCGCCACC
CCCATCACGC AGCGCGACCG CTGGGTGGCC AGCCCCTGGC TCGTGGCCCT GGCCGAGCGG
CCCGAGGAGC TCGCCGCCAC GCTCGCCGAG CACCTGCCCG AGGCCACCTC CTCGATGCTG
GTGCAGGCCG ACCTGACCGC GGTGGTCCCC GGGCGGCCCA CCCCCGAGCT CACGCGCCTG
CTGCACACCA CCACCGACGT GGAGTCCCGC GGCGGGGCGA CCACCCACCG CTTCAGCGAG
CGGAGCCTGC GCCGCGCCCT GGACGCCGGG CACCCCGCAT CGGAGGTCCG CGAGCGCGTC
GCGGCCGCCT CGGCGACGGG CCTGCCGCAA CCGGTTGAGT TCCTGCTCCG CGAGGTCGCG
GCGGGCCACG GCCGGGTGCA CGTCGGCGAC GCCCGGGCGG TGCTGGTGGT CGACGACCCC
GCCCTGGCCA CGCGCATGGT CCACGACCCG CAGCTGTCCC CCCTCGGGCT GGAGCAGGCG
GCCCCGACGG TGGTCACCTC GCGCCTGCCC GCCGCCCAGG CGCGCGCCTT CCTGCGCGAC
CACGGTTACG GCCCCTCGGT CGGCGAGGGT GCGGCGGGCG TCCCGGCACG GGTCACCCCG
CGCACCGCGC CGCCGGTCGC CTCCCGGCCC CTCACCCGCG AGCTCGCCCT CGACCGGGCG
CGGTCCCTCA CCGAGGCCAC GGCCCCGGAG GAGGGCGACG GCCCCGGGCG AGCAGCCGCC
CCCACCGCGC CACGGATGCA GAGCCGCGAC CCGATGGTGG TGCTCGCCCT GTTGCGCGAG
GCCGCCCAGG ATGGGGCGCC GGTGTGGATC TGGCACACCG ACGACCTCGG CGCGGTGCGG
ACCACCCTGG TCACGCCCAC CTCCGTGGAC GGTGGCCGGC TGTATGCGGT GAAGGACGCC
GAGAAGCTCA CGCGGACCTG GAGCATCCAC CGCATCGTGG GGGCCGCGGC GGGGGTGTGA
 
Protein sequence
MTPPSTPGGG FRSLAADLRG RSVDELADLL LARPDLARHS VEDLSALAAA ATTTTSTTRA 
LDSLDRPTLQ VLEAALVLAP TGADEVARAV DAPLREVTSR LDRLWTAALL WRSPEGLRPV
RILSELLPSP AGLAPASEAG APGAAPAATG PSLKDQLATV SDAGSALLRA LTWGPGVGTV
TASAPAATQE ARRELVAAGL LVDRSATTVQ LPREVALALR QGRTHRSLDV EPPAPETGAA
RRDAPLVDAA AAETSGLLSL TDELLLTLEV HPPAVLANGG LGVREVTAVE RRLGIDAPAA
HLLLTVAHAA GLMEVGAWPG ASDGHRWGPT PAADRWQQLP DPERAAQLLD AWWSTPLDPD
ATGTTAPPGR RAGARTGPAP DAGSGRSKRV NALSEAASSP TARHRRQELL GELAALGEES
GTVEELLARW AWRHPLRRPP APEAVAGVLE QARLLGLAAT PITQRDRWVA SPWLVALAER
PEELAATLAE HLPEATSSML VQADLTAVVP GRPTPELTRL LHTTTDVESR GGATTHRFSE
RSLRRALDAG HPASEVRERV AAASATGLPQ PVEFLLREVA AGHGRVHVGD ARAVLVVDDP
ALATRMVHDP QLSPLGLEQA APTVVTSRLP AAQARAFLRD HGYGPSVGEG AAGVPARVTP
RTAPPVASRP LTRELALDRA RSLTEATAPE EGDGPGRAAA PTAPRMQSRD PMVVLALLRE
AAQDGAPVWI WHTDDLGAVR TTLVTPTSVD GGRLYAVKDA EKLTRTWSIH RIVGAAAGV