Gene Ksed_21060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21060 
Symbol 
ID8373610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2177240 
End bp2178472 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content71% 
IMG OID644992355 
Productaspartate aminotransferase 
Protein accessionYP_003149864 
Protein GI256825904 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCGG ACCAGTCCGC ACCGCAGCAG CCCGCCCGCG TCTCCCGCCG CATCGGCGCG 
ATCGCCGAAT CCGCGACGCT GGCGGTCACC GCCAAGGCGA AGGAGCTCAA GGCCCAGGGC
CGGCCCGTCA TCGGCTTCGG CGCCGGCGAG CCCGACTTCC CGACCCCGGA CCACGTGGTC
GAGGCCGCGG CCGCGGCCTG CCACGACCCG GCGAACCACC GATACACCGC TGCCGGCGGC
CTGCCCGAGC TGAAGCAGGC CATCATCGAG GCCACCGCGC GCCACTCCGG ACTGGAGCTG
ACGCCCCAGC AGGTGCTGGT GACCAATGGC GGTAAGCAGG CCGTCTACAA CACCTTCGCC
GCCCTCATCG ACCCCGGTGA CGAGGTGCTG CTGCCCGCGC CCTACTGGAC GACCTACCCG
GAGTCCATCG CGCTGGCGGG CGGGACGCCC GTCGAGGTGT TCGCCGACGA GACCCAGGAG
TACAAGGTCA CCGTCGAGCA GCTCGAGGCC GCCCGCACCG GGAAGACCAA GGCCCTGGTG
TTCGTCTCCC CGTCCAACCC CACCGGCGCC GTGTTCACGC GCGACGAGAT GGAGAAGATC
GGCCGCTGGG CCCTGGAGCA CGGCATCTGG GTGGTGACCG ACGAGATCTA CGAGCACCTC
GTCTACGGCG ACGCCGAGTT CCACTCGGTG CCGGTCGTGG TGCCGGAGCT GGCCGACACC
TGCGTGGTGC TCAACGGGGT GGCCAAGACC TATGCGATGA CGGGCTGGCG CGTGGGCTGG
ATGGCCGGCC CCGCCGACAT CATCAAGGCC GCGACCAACC TGCAGTCGCA CGCGACCTCC
AACGTGGCCA ACGTCTCCCA GCGCGCCGCG ATCGCCGCCC TGAACGGCGG GCTGGAGGAC
GTGCACCGTA TGGGCGAGGC CTTCGACCGC CGTCGCCGGA CCATGGTGGC GATGCTCAAC
GAGATCGACG GGGTGGAGTG CCCGATCCCC GAGGGCGCCT TCTACGCCTA CCCGTCGGTC
AAGGGTGTTC TGGGCAAGCA GATCCGCGGC CAGCGTCCGC AGACCTCCTT GGAGCTGGCC
GAGCTGATCC TCACCGAGGC CGAGGTGGCC GTGGTGCCGG GCGAGGCCTT CGGGCCGTCG
GGCTACCTGC GCCTCGCCTA CGCACTGGGC GACGAGGACC TGGTGGAGGG CGTGGCCCGG
ATCCAGCGCT TGCTGGCCGA GGCGAGGGAC TGA
 
Protein sequence
MTPDQSAPQQ PARVSRRIGA IAESATLAVT AKAKELKAQG RPVIGFGAGE PDFPTPDHVV 
EAAAAACHDP ANHRYTAAGG LPELKQAIIE ATARHSGLEL TPQQVLVTNG GKQAVYNTFA
ALIDPGDEVL LPAPYWTTYP ESIALAGGTP VEVFADETQE YKVTVEQLEA ARTGKTKALV
FVSPSNPTGA VFTRDEMEKI GRWALEHGIW VVTDEIYEHL VYGDAEFHSV PVVVPELADT
CVVLNGVAKT YAMTGWRVGW MAGPADIIKA ATNLQSHATS NVANVSQRAA IAALNGGLED
VHRMGEAFDR RRRTMVAMLN EIDGVECPIP EGAFYAYPSV KGVLGKQIRG QRPQTSLELA
ELILTEAEVA VVPGEAFGPS GYLRLAYALG DEDLVEGVAR IQRLLAEARD