Gene Ksed_19840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19840 
Symbol 
ID8373488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2068376 
End bp2069050 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content74% 
IMG OID644992236 
Producthypothetical protein 
Protein accessionYP_003149746 
Protein GI256825786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00128343 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGCCGC ACCCTGCCTC GAGCCCCCGC CCCGGGGTGT CGGGACAGCA GTCCGGAACC 
CCCGGCACGG GAGGTCGCCG CTCGGCAGAG GACCTCCTGG CCGAGTGGCG GGCTCGCGGC
GAGGTCGTCG TCGAGGCGGC CCGTCCGGCG TTCCTGTTCG CCTCCTCCAT CCTGCTTCCG
CTCAGCATCG GGGCGCTCCT GTTCGGCCTC GTGGCTGCCG GCGTCGCGGT GGTCCAGTCC
GAGCCCTCGG CCGCGGTCGC CGCCGTCGGC GTGTTCGCGC TCGCGATCGC CCTCGCGGCC
GGCGCGTGGT GGGCGCGACG TGCCAGCCGC AGCCGCCCGG GGCGCGTGTG GGTGGTCAGC
CGGCAAGGCA TCACCATCGA CGGGGTGGGG CCCATTCCCT GGGGCGACCT CGAACCGCCG
ACCCAGCGCA TGGAGCCCGC TCCGCGGGAC GAGGGCAACC AGCTGGCCCT GGTGATGCCC
TTCACCCCCG CGGGTCAGCA GCAGGCCGAC CTGCTGGACC CCTCCCTGCG AGCGGTGCTC
AACGAGAACG CCGCCCCCCG GGTGTTCGGC ACCCCACGGG TGACCTCGGT GCGCATCGTG
GCGATGAAGG GCACCTCCCA GCGTGAGTTC TTCCGCTTCT TGACGTGGGC CCACACCGAG
CGGACCGGGT CGTGA
 
Protein sequence
MTPHPASSPR PGVSGQQSGT PGTGGRRSAE DLLAEWRARG EVVVEAARPA FLFASSILLP 
LSIGALLFGL VAAGVAVVQS EPSAAVAAVG VFALAIALAA GAWWARRASR SRPGRVWVVS
RQGITIDGVG PIPWGDLEPP TQRMEPAPRD EGNQLALVMP FTPAGQQQAD LLDPSLRAVL
NENAAPRVFG TPRVTSVRIV AMKGTSQREF FRFLTWAHTE RTGS