Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_19550 |
Symbol | |
ID | 8373460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 2037985 |
End bp | 2038995 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644992210 |
Product | ABC-type dipeptide/oligopeptide/nickel transport system, permease component |
Protein accession | YP_003149720 |
Protein GI | 256825760 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0704551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCCGCT TCATCGCGCG CCGTCTGCTG CAGATGGTGC TCGTCCTGCT CGTGTTGAGC CTGCTGCTCT TCTTTTGGCT CCGCTCCCTG CCCGGCGGGG CGGTCGGTGC CCTGCTGGGC GACCGCGGCA CCCCCGAGGC ACGGGCGGCG CTCGAGGCCC AACTCGGCCT CGACCAACCG CTGCCGATGC AGTACGTCGC CTTCGTGCAG CGCTGCCTCT CCGGAGACTT CGGGGTCTCC ACGGCCCTGC TGCCCGGCAC TCCGGTGACC GACATCCTCA TCGAGCGCGC ACCGGCCACC ATCGAGCTGT CCGTCCTCGC CATCCTGTTG GCCACCGCGG CGGGCATCCC CCTGGGCTAC TTGGCCGCGC GCCGCCACGG CGGCATCTTC GACAACCTGT CGGTCGTCAG CTCGCTGGTG GGCGTGGCCG TGCCCGTCTT CTTCCTCGCG TACATGCTGC GCTGGTTGTT CGCCGTCGAG CTGGGCTGGC TCCCGGTCTC CGGCCGCCAG GACCCCGGGC TGGACGCGAC GCACATCACG AACTTCTTCA TCCTCGACGG CCTGATGACG CGGGAGTGGG ACGCCGCCTG GGATGCCTTC AAGCACCTGA TCCTGCCGGC ACTGGCGCTC GCCTCGATCC CGTTCGCGGT GATCTTCCGC ATCACCCGCG CCTCGGTGTT GGAGGTGCTC GACGAGGACT ACGTGCGCAC CGCCCAGTCC AAGGGGCTGG CCAGCCGCGT GATCCGCGGG CGCCACGTGA TGCGCAACGC CATGATCCCG GTGGTCACCA TCATCGGCCT CCAGGTGGGT GCGCTGCTCG CCGGCGCCGT GCTGACCGAG AAGGTCTTCT CGATCGCCGG TCTGGGCAAT GCCCTGGCCG TCTCCTTCAC CCAGCGCGAC TACCCGATGC TGCAGCTGCT GATCATGGTG GCGGCCGGTG TCTACGTGGT CGTCAACCTG ATCGTCGACA TCCTCTACGC GGTCATCGAC CCGCGCGTCC GGACGAGGTG A
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Protein sequence | MIRFIARRLL QMVLVLLVLS LLLFFWLRSL PGGAVGALLG DRGTPEARAA LEAQLGLDQP LPMQYVAFVQ RCLSGDFGVS TALLPGTPVT DILIERAPAT IELSVLAILL ATAAGIPLGY LAARRHGGIF DNLSVVSSLV GVAVPVFFLA YMLRWLFAVE LGWLPVSGRQ DPGLDATHIT NFFILDGLMT REWDAAWDAF KHLILPALAL ASIPFAVIFR ITRASVLEVL DEDYVRTAQS KGLASRVIRG RHVMRNAMIP VVTIIGLQVG ALLAGAVLTE KVFSIAGLGN ALAVSFTQRD YPMLQLLIMV AAGVYVVVNL IVDILYAVID PRVRTR
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