Gene Ksed_19510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19510 
Symbol 
ID8373456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2031599 
End bp2032489 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content65% 
IMG OID644992206 
Producthypothetical protein 
Protein accessionYP_003149716 
Protein GI256825756 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.150154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0265241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATGG AACTGCGCGA GTACATCGAC CGTCTCTCCC GCGAGGGGTA CACGGTCCGC 
GACGACCAGG GGTCGGACCC GGACCTCATC GACCCCGGCG GCCGCGCGGT GGAGACCTGG
CGGGAGAACT ACCCGTACGC CGAGCGTATG ACGCGCGAGG ACTACGACGT GGAGAAGTAC
CTGCTGCAGG TGGAGCTCAT CAAGCTGCAG AACCACACCC TGAACACCGG GCAGCGCCAC
ATCCTGGTCT TCGAGGGGCG CGACGCCGCC GGCAAGGGCG GCACCATCAA GCGCTTCACG
GAGCACCTGA ACCCCCGATT CGCCCGCGTG GTGGCGCTCA ACAAGCCCAG CGAGCGCGAG
CTGGGCCAGT GGTACTTCCA GCGCTACGTC AACCACTTCC CCACCGCCGG CGAGATGGTC
TTCTTCGACC GCTCCTGGTA CAACCGCGCC GGGGTGGAGC GGGTCATGGA CTTCAGCACC
CGTGACGACT ACGAACAATT CATGGAACAG GCACCGCAGC TGGAGAAGAT GATCACCGAC
GCGGGGACGA CGCTCACCAA GTTCTGGTTC TCCGTGACCG CCCACGAGCA GCGCACCCGC
TTCGCCATCC GCCAGATCGA CCCGGTGCGG CGCTGGAAGC TCTCCCCCAT GGACCTGGCC
TCGCTGGACA AGTGGGACGC CTACACCGAG GCCAAGGAGG AGATGTTCGC CCGCACGGAC
GTCGACTGGG CGCCGTGGAT CACGATCAAG TCCAACGACA AGAAGCGGGG CCGCATCAAC
GCCATGCGCT ACTTCCTGAG CCAGTTCGAC TACGAGGGCA AGGACACCGA CATCGTGGGC
TCACCCGACC CGCAGATCGT GAAGCGCGCG AAGGACACCA TCGGCGACTG A
 
Protein sequence
MQMELREYID RLSREGYTVR DDQGSDPDLI DPGGRAVETW RENYPYAERM TREDYDVEKY 
LLQVELIKLQ NHTLNTGQRH ILVFEGRDAA GKGGTIKRFT EHLNPRFARV VALNKPSERE
LGQWYFQRYV NHFPTAGEMV FFDRSWYNRA GVERVMDFST RDDYEQFMEQ APQLEKMITD
AGTTLTKFWF SVTAHEQRTR FAIRQIDPVR RWKLSPMDLA SLDKWDAYTE AKEEMFARTD
VDWAPWITIK SNDKKRGRIN AMRYFLSQFD YEGKDTDIVG SPDPQIVKRA KDTIGD