Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_18390 |
Symbol | |
ID | 8373344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 1911168 |
End bp | 1913333 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644992095 |
Product | transcription termination factor Rho |
Protein accession | YP_003149607 |
Protein GI | 256825647 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.945824 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGC CGGCCGAGAA CCCGAAGCGT TCCACGGCCC TGAGCGTTCT CCGCCTGGCC GAGCTCCAGG AGCTGGCCGC CAGCATGGGC ATCGACACCA CCAAGAAGCG CAAGGGGGAC CTGGTCGCCG AGATCCGCCA GGCGCGCGTG GACGCCGGGT CCGCCCAGCC GTCCGCGGCC GCACAGGGTG GGGAGACCGA GCAGGCCGAG CAGGCCGCCC CCCGCCGTGA GCGCACCCGC GCCACCAGCG ATGCGGGGCA GGCTCCCACC GCCGGCACCA CGACCTCCGA CGCCCCCGAG AACGCGGCCG CGTCGACCCC CGAGGACGTC CAGGACGCCC CGGGGACGCG CGGCACCCAG AACACGTCCG ATGAGGGCGA CGACAGCGAC GGCGGCTCCG GCCGCACCCG TCGTGGTCGC CGTGGCGGCC GCACCCGCGG CGAGTCCGGT CAGGACGGCC AGCAGGACGA CCACCAGCAG GACGAGCGCG GTGCGCGCGG CCAGCAGGGC CAGGACGACC GCAGCTCCCG GGACCAGCAG GACGACGCCC GCACCCAGCG TGAGCAGCAG TTCCAGCAGG CACCGCAGAC CGACGAGCGC GACGACCGGG GCCAGCGCGA GGACCGCGAC GAGCAGGACG GCCAGCAGCG CGAGTCCCGC GGGGACCGCG GCAACCGGGG CGACCGCGCC CAGGACGACC CCCGTCAGGG CCAGGACAGC CGTGGGGACA ACGGACCGGA CCGGGGCGGC GACGACGAGG ACGACGAGCG CGGCGGACGA CGCCGCAGCC GCCGCAACCG TCGCAACCGG GGCCGCGGTC GTGGGGACGA CGATCAGCAG GGCGGTCAGC AGAACCGCGA CGGCCGGGGC GACCGCGACG GCCGCCAGGA CCGCGGGGAC CAGCAGGGCG GTGGCCAGCA GAACCGCAAC CAGGACCGCA ACCAGAACCG CGGCGGCCAG GACAACGACG CCGACCTGGT GCCGATCGCC GGCATCCTGG ACGTGCTCGA CTCCTACGGG TTCGTGCGCA CCACCGGCTA CCTGCCCGGC CCGAGCGACG TCTACGTGCC CATGCAGATG ATCAAGCGCC ACGGCCTGCG CAAGGGTGAC GCCGTGATCG GCCGCATCAA GCCGCGTCAC GACCTCGAGG ACGACAACTC GACGCCCACC CCGCAGCAGG GCCGCCGCAA CCAGAAGGCG AACAAGAACA AGTTCAACGC CTTGGTGAAG GTTGACCAGG TCAACGGCCT GGACCCCGAG GATGCGCGCC GCCGCGTGGA GTTCGGCAAG CTCACGCCGC TCTACCCGCA GCACCGCATG CGCCTGGAGA ACGGCCAGAA GAACTACACC AACCGGATCA TCGACCTGGT GGCGCCGATC GGCAAGGGCC AGCGCGGCCT CATCGTGGCC CCGCCGAAGG CCGGCAAGAC GATGATCCTG CAGGCCATCG CCAACGCCAT CACGGAGAAC AACCCCGAGG CGCACCTCAT GATCGTCCTG GTGGACGAGC GCCCCGAGGA GGTCACCGAC ATGCAGCGCA CGGTCGCCGG TGAGGTCATC GCCTCCACCT TCGACCGTCC CGCCGACGAC CACACGATCG TGGCCGAGCT CGCCATCGAG CGCGCCAAGC GTCTCGTGGA GATGGGCAAG GACGTGGTGG TGCTGCTGGA CTCCATCACC CGTCTGGGCC GCGCCTACAA CATCGCGGCG CCCGCCTCCG GCCGGATCCT GTCCGGTGGT GTGGACTCCT CGGCGCTGTA CCCGCCGAAG CGCTTCTTCG GTGCCGCGCG CAACATCGAG AACGGTGGCT CGCTCACCAT CCTCGCCACG GCGCTGGTGG AGACCGGATC GAAGATGGAC GAGGTGATCT TCGAGGAGTT CAAGGGCACC GGCAACATGG AGCTGCGTCT CTCGCGCCAG CTCGCCGACC GCCGCATCTT CCCGGCCGTG GACGTCAACG CCTCGGGCAC CCGCAAGGAG GAGATCCTCC TCAACGCCGA GGAGCTCAAG GTGGTCTGGA AGCTGCGCCG CGTGCTCTCC GCGCTGGACA GCCAGGCCTC GATCGAGCTG CTGCTGGACC GCATGCGCAA GACCGGCAGC AACGGCGAGT TCCTGATGCA GGTGCAGCAG ACCTCCTCGA TCAAGCTGGA GGACGAGGAG GACTGA
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Protein sequence | MTQPAENPKR STALSVLRLA ELQELAASMG IDTTKKRKGD LVAEIRQARV DAGSAQPSAA AQGGETEQAE QAAPRRERTR ATSDAGQAPT AGTTTSDAPE NAAASTPEDV QDAPGTRGTQ NTSDEGDDSD GGSGRTRRGR RGGRTRGESG QDGQQDDHQQ DERGARGQQG QDDRSSRDQQ DDARTQREQQ FQQAPQTDER DDRGQREDRD EQDGQQRESR GDRGNRGDRA QDDPRQGQDS RGDNGPDRGG DDEDDERGGR RRSRRNRRNR GRGRGDDDQQ GGQQNRDGRG DRDGRQDRGD QQGGGQQNRN QDRNQNRGGQ DNDADLVPIA GILDVLDSYG FVRTTGYLPG PSDVYVPMQM IKRHGLRKGD AVIGRIKPRH DLEDDNSTPT PQQGRRNQKA NKNKFNALVK VDQVNGLDPE DARRRVEFGK LTPLYPQHRM RLENGQKNYT NRIIDLVAPI GKGQRGLIVA PPKAGKTMIL QAIANAITEN NPEAHLMIVL VDERPEEVTD MQRTVAGEVI ASTFDRPADD HTIVAELAIE RAKRLVEMGK DVVVLLDSIT RLGRAYNIAA PASGRILSGG VDSSALYPPK RFFGAARNIE NGGSLTILAT ALVETGSKMD EVIFEEFKGT GNMELRLSRQ LADRRIFPAV DVNASGTRKE EILLNAEELK VVWKLRRVLS ALDSQASIEL LLDRMRKTGS NGEFLMQVQQ TSSIKLEDEE D
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