| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_18130 |
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| Symbol | |
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| ID | 8373318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 1886823 |
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| End bp | 1888496 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644992070 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_003149582 |
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| Protein GI | 256825622 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 0.850315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.619608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGA TCGCATCGGT GGGAATTGTC GGACTGGGCA CCATGGGCGC CGGGATCGTG
GAGGTCTTCG CGCGCGGAGG CCTGCGCGTG GTCGGCGTGG AGATGAGCCC CGAGCTGGCC
GAGCGCGGCC GCGGGTTGCT GGAGAAGTCC ACCGCCCGCG CCGTGGAGAA GGGCAAGCTG
GACGAGGCGG ACCGCGCCGG CATCCTCGAT GCGGTGACCT TCACCGCCGA CCTGGCGGAC
CTCGCCGAGG TGGACCTGGT GGTCGAGGCG GTGCCCGAGA AGATGGCGAT CAAGCACGAC
ATCTTCGGCA AGCTCGATGC CGCCACCAAG CCCGAGGCGA TCCTCGCCAC GAACACCTCC
AGCCTGTCGG TCACCGAGAT CGCCTCCGGC ACGCAGCGCC GCAACCGCGT GGTCGGGATG
CACTTCTTCA ACCCCGCGCC GGTGCAGAAG CTCGTGGAGG TCATCCACAC ACCGACCACC
GACGACGACG CCGTGGCCGC CGTGGCCGAG CTCGCCACCC GCCTGGGCAA GGAGCCCGTG
GTGGTGGCCG ACCGGGCCGG CTTCGTGGCC AACCACCTGC TCTACGGCTA CATGAACCGC
TCCGGCCAGC TGTACTTCGA CGGCGCGGTG AGCGCCGAGG ACCTCGACAC CGCGATGCAC
GTGGGCGCCG GGCTGCCGAT GGGGCCGCTC ACCCTCATGG ACATGGTCGG GCTGGACGTG
TGCAACGGCA TCGGCGGGGT CATCCACTCG CTGACCCACA AGGCCATGCA TGCGCCCTCC
TACGAGCTGG CCACGATGGT GAACGCCGGC CTGCTGGGCC GCAAGAGCGG CGCGGGCTTC
CACCCGTACT CCGAGGAGGC CCGGGCGGCC GCCGCGCAGT CCGCCGATGA CGCCGCCGCG
CCGGCCCGCG ACGTGTCCGT CGTGGGCGTG ATCGGCGCAG GGGACGCAGC CGGGGAGCTC
GCGGAGGCCT TCTCGGGCGC GGGGCTGGAG GTGCTCCGCA TCGAGGAGGC CGGCGACGAC
CTCTCCGTGC TGTCGCGCGC GCAGGTGGTC GTCGAGGCCG CCGAGCTGGT CGAGTCCACC
GAGGTGGACT GGGACGAGCT CGACGACGAG GAGCTCGAGG AGGACGCCGC CCTGGTGGAG
CTCGACGCGC TCTTCCTGGA GCTGGGCCGC GTGCTGGAGC CCGATGCGGT GATCGTGTCC
CTGACCGCGG ACTCCACCGT GGACCTCGCG GTCACCAGCG GGCGCCACAT GGCCTCGCTG
CGGGCGGTGC TCCACGAGGC CACGCCGTAC GGTCGCCTCA TCGAGTTCGG GCGGATCACG
ACCACGGCGC CCGAGGTGGA GGCCACGGTC CGTGCCCTGG TGCAGAGGGC CGGGTTGACG
CCCGTGGTGG TGCGGGACCA GCCGGGGCTC GTGGTCGAAT GGCTGCTGGT GCCCTTCCTC
AACGAGGCGG TGCTCATGGC GCAGTCGGGC TACGCCAGCT CCGAGGACAT CGATACCGCG
ATGGTCCACG GCTGTGGCTA CCCGATGGGG CCGTTCGCCC TGCTCGACCA CCTCGGTGCC
GCCCACGTGC TCGACGTGCA GTCCGAGCTG TTCGGGGCCA CGCAGGAGCC GGGCCTGGCG
CCCGCCGCCA GCCTGGTGGA CCACGCGGTG CTGGACCTGC CCTTCGGCGC CTGA
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| Protein sequence | MTQIASVGIV GLGTMGAGIV EVFARGGLRV VGVEMSPELA ERGRGLLEKS TARAVEKGKL
DEADRAGILD AVTFTADLAD LAEVDLVVEA VPEKMAIKHD IFGKLDAATK PEAILATNTS
SLSVTEIASG TQRRNRVVGM HFFNPAPVQK LVEVIHTPTT DDDAVAAVAE LATRLGKEPV
VVADRAGFVA NHLLYGYMNR SGQLYFDGAV SAEDLDTAMH VGAGLPMGPL TLMDMVGLDV
CNGIGGVIHS LTHKAMHAPS YELATMVNAG LLGRKSGAGF HPYSEEARAA AAQSADDAAA
PARDVSVVGV IGAGDAAGEL AEAFSGAGLE VLRIEEAGDD LSVLSRAQVV VEAAELVEST
EVDWDELDDE ELEEDAALVE LDALFLELGR VLEPDAVIVS LTADSTVDLA VTSGRHMASL
RAVLHEATPY GRLIEFGRIT TTAPEVEATV RALVQRAGLT PVVVRDQPGL VVEWLLVPFL
NEAVLMAQSG YASSEDIDTA MVHGCGYPMG PFALLDHLGA AHVLDVQSEL FGATQEPGLA
PAASLVDHAV LDLPFGA
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