Gene Ksed_17980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17980 
Symbol 
ID8373303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1870755 
End bp1871303 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content74% 
IMG OID644992055 
Productcompetence/damage-inducible protein cinA 
Protein accessionYP_003149567 
Protein GI256825607 
COG category[R] General function prediction only 
COG ID[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00199] competence/damage-inducible protein CinA C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.0541043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.565782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCAAG GGGCGCGCGC GCTCGTGACC GGCGGGCAGG GCGACGACCT GGCGCGCACC 
CTCATCGAGC AGCTCACGCG GCGGGGGGAG ACCCTGGCGG TCGCCGAGTC CCTCACCGGC
GGGCTGGTCT GCGCCGCCCT CACCGACGTG CCCGGCGCCT CGCTGGCCCT GCGCGGGGGA
GCGGTCTCCT ACGCCACCGA CCTCAAGGCC TCCGCGCTGG GCGTCGATGC GGGGCTCCTC
GCGCGCGAGG GCCCGGTCCA CGCCGACGTC GCCGAGCAGA TGGCTGCCGG CGTGGCCCGA
TGGGGTGACG CCACCTGGGG ACTGTCGACC ACCGGCGTGG CGGGGCCCGG TCCGACGGAC
GGTCACCCGG CCGGCACGGT GTACGTCGGG GTGGCGAGAG TCGCGGCGGG GGAACAAACC
ACCGCCCACA GGGCGTTCTG TTTCTCCGGG GACCGCACCG CGGTGCGACG CGCTTCTGTG
GAGGCGGCGC TGCAGGAAAT TCTCAGGCAA CTAGACTTCA CTGAACCCCT CGGGGACACG
ACGCACTGA
 
Protein sequence
MGQGARALVT GGQGDDLART LIEQLTRRGE TLAVAESLTG GLVCAALTDV PGASLALRGG 
AVSYATDLKA SALGVDAGLL AREGPVHADV AEQMAAGVAR WGDATWGLST TGVAGPGPTD
GHPAGTVYVG VARVAAGEQT TAHRAFCFSG DRTAVRRASV EAALQEILRQ LDFTEPLGDT
TH