Gene Ksed_17410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17410 
Symbol 
ID8373246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1806659 
End bp1809397 
Gene Length2739 bp 
Protein Length912 aa 
Translation table11 
GC content71% 
IMG OID644992006 
Producthypothetical protein 
Protein accessionYP_003149518 
Protein GI256825558 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.567848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0511463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACC AGCCCAGGAC CTCCGCCGAG CACCAGCGCC TCGAACAGTC CCCGGGACAG 
GACGATCCCT GGCGGCTGTG GGGGCCGTAC ACCGCCGCAC GGCAGTGGGG GACCGTGCGC
GAGGACTACT CCGCCGACGG GGACGCCTGG ACCTACTTCC CCTTCGACCA CGCCCACCAG
CGCGCCTACC GATGGGGTGA GGACGGCCTG GCGGCGATCA GCGACCGCTT CGGCTTCCTG
AACCTCGGGC TGGGCCTGTG GAACGGGCAG GACGACCGCC TGAAGGAGCG CCTGTTCGGG
CTGTCCGGCC CGCAGGGCAA CCACGGCGAG GACGCCAAGG AGTACTGGTG GGCGCAGGAC
GCCACCCCCA CCCATTCCTG GAGCTCCTAC CTCTACCGCT ACCCGCAGGC CGCGTTCCCC
TACAGCGAGC TCGTCGAGCG CAACGCCGCC GCGGGCTTCG CCGACGACGA GGTGGAGCTC
GCCGACCTGG GCCTGCTGGA GGGCAACCGC TTCTTCGACG TCGAGGTGCA GCACGCCAAG
GCCAGCGAGA CCGACGTCGT GGTGCGCATC ATCGCCACGA ATCACGGTCC CGAGGCCGCC
CCGGTGCACC TGGTGCCACA GCTGTGGTTC CGCAACACCT GGTCCTGGGG CCGCGACGAT
CGGCGGCCCA GCCTGCGCCG GACGGGCGCC GACGGCGACG ATGCGGTGTC GGCAGCGCGC
GTGCGCGCCG AGCACGAGTG GCTCGGCACC TACGAGGCGA CGGCCGTCGA CGGTCAGGGC
AACGCTCCGG CATCGATGAT CTTCTGCGAA AACGAGACCG ACGAGGCGGC AGTGTTCGGC
GCCGAGTCCA CCGGCAGTCC CTATCCGAAG AACGCGGTGG ACCGCGCGGT GGTGCACGGG
CAGGGCGCGG GCAACCCGGA GCAGACCGGC ACCAAGTGCG CCTGGCACTT CGTGTTCGAG
GCCGTGGAGC CCGGGCAGTC GGTCAGCGTG GACGTGCGCC TGGCCGGCAT GGCCCCGGCC
ACCGGCGACC CGGAGCGCCC GGCCGCCGTC GCGGCACCCA TGCCCTCGGC CTGGGGAGCC
CAGCGGGGGG TGACGCTCGA CGGCATCGAG GAGGTGCTCG CCGCGCGCCG GGCGGAGGCC
GACGAGTTCT ACGGCGAGGT GATCCCCGCC ACGGTCAGCG ACGAGGAGAG GCATGTGGCC
CGCCGCGCGT TCGCCGGACT GATGTGGGCC AAGCAGCTCT ACCGCTACTC GGTGAGCCAG
TGGTTGGAGG GCGACCCCGC ATCCCCCCCG CCGCCGGCCG CCCGCCAGAC CGCGGCCACC
GGCCGGAACA CCGACTGGAG CCACCTGGAC CTCGCCGACG TCATCTCGAT GCCGGACGAG
TGGGAGTACC CGTGGTTCGC CACCTGGGAC ACGGCCTTCC ACACCGTCGC GATGGCGCAC
GTCGACCCGG CGTTCGCCAA GGCGCAGCTG GTGCTCATGG TGCGTGAGTG GGCACAGCAC
CCCAACGGGC AGCTCCCGGC CTACGAGTGG GACTTCGGCG ACACCAACCC GCCGGTGCAC
GCTTGGGCCT GCTGGCAGGT CTACCGGCTC GACGGCGCCT GGGACCGCGG CTTCCTGGTG
CAGACCTTCA CCAAGCTGAT GATGAACTTC CAGTGGTGGG TCAACCGCAA GGACCCGGAG
GGCTCGTTCC TGTTCACCGG GGGCTTCCTG GGCATGGACA ACATCGCCTT CTTCGACCGC
TCGGCCACGC CCGAAGGGGT GCGCCTGGAG CAGAGCGACG CCACCAGCTG GATGGCCTTC
TTCTCGCTGT CGATGCTTCG GGTGGCCCTC GAGCTGAGCC GCGAGGACGC CTCCTGGGAC
GGGGCCTGCA CCACCTTCTT CGAGTACTTC CTGCGGATCG ACCGGGCGAT GGAGTCCCCG
GGCTCCGGGG GCGTAACGCT GTGGAACGGC GAGGACGGCT TCTTCTACGA CTCGCTGGTG
ACCCCCGAGG GGACGGCCGA GCAGCTGAAG GTCCGCTCGA CCGTGGGCCT GCTGCCGCTG
ATGGCCGTGG GCGTGGTGCC GACCTGGGTG TGGAGCGAGC TGCACGGCTT CCACGCCGAG
GTGGACTGGC TGCAGGAGCG TCGCCCCCAT CTGACCAAGG GGCTGGTGGT GCTCGGCGGC
GAGGAGGACC GGTCGGCGAT GCTCACCCTG GTGGGTGCTG AGCGCCGGGC GCGGATCCTG
TCCCGCATGC TCGATGAGGG GGAGTTCCTC TCGCCGTTCG GGTTGCGCTC GCTGTCGGCC
GCCCACCGCG AGGGGGTCTC CGCGACCCTC GACGGACGGG ACTTCGAGCT GCACTACACC
CCGGGCGTCT CGGACAACGC GATGTTCGGC GGCAACTCGA ACTGGCGCGG GCCGATCTGG
TTCCCGACCA ACCTGCTGCT GCTGGACGCG CTGGCCGTGA TGGCCGAGGC GGACCCGTCG
GCCACGCAGG AGTTCCCCAC CGGGTCCGGG CAGCAGGTGC CGCTCAGCGA GATCGCGGCC
GACCTGCGCG GGCGGCTGGT GTCGCTCTTC CTACCCGATG GGGACGGCCG TCGCCCGGGC
ACGCCGACCC ACCACCCCGC CGGCGAGCTG TGGGACGTCC ACCCCACGTT CAGCGAGTAC
TTCGACGGCG ACACCGGCGT GGGGCTGGGC GCCTCGCACC AGTGCGGGTG GACCGCGCTG
GTGGCTCACC TCATCTGCGC CCACGGTCCA CAGGACTGA
 
Protein sequence
MPDQPRTSAE HQRLEQSPGQ DDPWRLWGPY TAARQWGTVR EDYSADGDAW TYFPFDHAHQ 
RAYRWGEDGL AAISDRFGFL NLGLGLWNGQ DDRLKERLFG LSGPQGNHGE DAKEYWWAQD
ATPTHSWSSY LYRYPQAAFP YSELVERNAA AGFADDEVEL ADLGLLEGNR FFDVEVQHAK
ASETDVVVRI IATNHGPEAA PVHLVPQLWF RNTWSWGRDD RRPSLRRTGA DGDDAVSAAR
VRAEHEWLGT YEATAVDGQG NAPASMIFCE NETDEAAVFG AESTGSPYPK NAVDRAVVHG
QGAGNPEQTG TKCAWHFVFE AVEPGQSVSV DVRLAGMAPA TGDPERPAAV AAPMPSAWGA
QRGVTLDGIE EVLAARRAEA DEFYGEVIPA TVSDEERHVA RRAFAGLMWA KQLYRYSVSQ
WLEGDPASPP PPAARQTAAT GRNTDWSHLD LADVISMPDE WEYPWFATWD TAFHTVAMAH
VDPAFAKAQL VLMVREWAQH PNGQLPAYEW DFGDTNPPVH AWACWQVYRL DGAWDRGFLV
QTFTKLMMNF QWWVNRKDPE GSFLFTGGFL GMDNIAFFDR SATPEGVRLE QSDATSWMAF
FSLSMLRVAL ELSREDASWD GACTTFFEYF LRIDRAMESP GSGGVTLWNG EDGFFYDSLV
TPEGTAEQLK VRSTVGLLPL MAVGVVPTWV WSELHGFHAE VDWLQERRPH LTKGLVVLGG
EEDRSAMLTL VGAERRARIL SRMLDEGEFL SPFGLRSLSA AHREGVSATL DGRDFELHYT
PGVSDNAMFG GNSNWRGPIW FPTNLLLLDA LAVMAEADPS ATQEFPTGSG QQVPLSEIAA
DLRGRLVSLF LPDGDGRRPG TPTHHPAGEL WDVHPTFSEY FDGDTGVGLG ASHQCGWTAL
VAHLICAHGP QD