| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_15420 |
|---|
| Symbol | |
|---|
| ID | 8373048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 1582797 |
|---|
| End bp | 1583360 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644991810 |
|---|
| Product | HIT family hydrolase, diadenosine tetraphosphate hydrolase |
|---|
| Protein accession | YP_003149327 |
|---|
| Protein GI | 256825367 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.0547976 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC TCCCCGAGTC AGCGGCCGAC CTCCCCGGCG TCCCCGACGG CTTCCAACGC
CTGTGGGTGC CCCACCGGAT GGCCTACCTC GAGGCGAACC CCTCGCGCGG GGGCGAGCCG
GCGGGCTGTC CCTTCTGCGA CAACCCCCGG CGCAGCGATG CCGACGGGCT GATCGTCGCG
CGCGGTGAGC ACTGCTTCGT GGCCATGAAC CTCTTTCCGT ACAACCCCGG CCACCTGCTG
GTCTGCCCCT ACGAGCACGT GCCGGAGTAC CTGGACCTCG CGGGCGACGC GCTGGCCGAG
TTCACGGCCC TGACCCGACA GGCCCTGCGC ACCGTGCGGG CCGTCTCCGG GTGCCACGGC
TTCAACCTGG GTATGAACCA GGGGGCGATC GCCGGCGCCG GGGTCGCCGA GCACCTGCAC
CAGCACGTGG TCCCGCGGTG GGCCGGGGAC GCGAACTTCT TCCCCATCGT GGCCCGGACG
AAGGCGGTGC CGCAGCTGCT GGAGGACACG CGTGCCGCAC TCGCCGAGGC CTGGGGGGAC
CACGCCGAGG AGCCGGCGCC CTGA
|
|---|
| Protein sequence | MSELPESAAD LPGVPDGFQR LWVPHRMAYL EANPSRGGEP AGCPFCDNPR RSDADGLIVA
RGEHCFVAMN LFPYNPGHLL VCPYEHVPEY LDLAGDALAE FTALTRQALR TVRAVSGCHG
FNLGMNQGAI AGAGVAEHLH QHVVPRWAGD ANFFPIVART KAVPQLLEDT RAALAEAWGD
HAEEPAP
|
|---|
| |