Gene Ksed_14540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_14540 
Symbol 
ID8372962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1494597 
End bp1495082 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content67% 
IMG OID644991726 
Productsortase-like acyltransferase 
Protein accessionYP_003149244 
Protein GI256825284 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.211853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.158837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA TCCGCGAGGC CCGGGACGCC GACCTCGACG ACATGGTCGA GGTGCAGAAC 
GCCATCCACC GCGCCGGGCT GCGAGCGAGT CCGGTCGATG CGTCGCTCAT CCACGAGCGC
TACCTCGACC CCGCACACCG CATCGCGTGC ACCGTCGCCG TGCAGGACGG ACACGTCATC
GGCTTCCAGT CGCTCAAGCG GGCGTGGCCC GGCAACCCAT ACGACGTGGC GCCCGGGTGG
GGAATCATCG GCACCCACAT CCGGCCGGAT GCCGGACGCA CCGGCCTGGG CCGTCACCTG
TGGGCGGAGT CTCTGGAGGC CGCACGTACT GCTGGGCTGG AGCACATCGA CGCGACCATT
GGCGCTGACA ACGACCCAGC TCTGGCCTAC TACGCCGCGA TGGGATTCGT GCCCTATCGC
GACAACGGCT CCAGCATCCC CCATCGATTC GACGTGCCGG CGCCAGCAGA TCTAGAACAG
CTCTGA
 
Protein sequence
MIKIREARDA DLDDMVEVQN AIHRAGLRAS PVDASLIHER YLDPAHRIAC TVAVQDGHVI 
GFQSLKRAWP GNPYDVAPGW GIIGTHIRPD AGRTGLGRHL WAESLEAART AGLEHIDATI
GADNDPALAY YAAMGFVPYR DNGSSIPHRF DVPAPADLEQ L