Gene Ksed_14500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_14500 
Symbol 
ID8372958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1491647 
End bp1492213 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content73% 
IMG OID644991723 
Productconserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
Protein accessionYP_003149241 
Protein GI256825281 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.111122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCT GGACCTGGCT GGGCGACCAC CTGGCGCTCG ACTTCGCGAA CACCACACAG 
GAGCAAGGGG GCACGATGGT GGACCTCATC CCCACGCTCG CGGAGTTCGA CGCGTGGCGG
TCCGCGATGG GGGATCGCCT GCCCGAGGTG GGTGAGCTCA CCACCTCACA GCTGGATGAC
CTGCGCTCCC TGCGGGACAG CGCGCTGGCG TTGATGCACG CCGCTCTGGG TGGGCACGGG
CTGCCCGAGC CCGACCTGGC TGCGGTCAAC GAGGCGGTGC GGAGCACCTC GACCTTCCGG
CTGCTGGTGC GGGCGCGGAA GGCCGACGCT GTCGCCGGCC ACCACGAGGG CACCGAGGCG
CTGCGCGGAG TCCTTGCGGC TGCCGTGGTG GACCTGCTGG CGCGGGAGGA CCTGGCGAAC
CTCGCCGTGT GCCACGCGCC CGGGTGCGGG CAGTTCTTCC ATCGGGCGCG CCCCAACCAA
CGGTGGTGCA GCCCCGGGTG CGGGAACCGC GCCCGGGTCG ACCGACACCG ACACCGACGC
GCCCGCCCGG CAGGGGAGGG GCAGTGA
 
Protein sequence
MTTWTWLGDH LALDFANTTQ EQGGTMVDLI PTLAEFDAWR SAMGDRLPEV GELTTSQLDD 
LRSLRDSALA LMHAALGGHG LPEPDLAAVN EAVRSTSTFR LLVRARKADA VAGHHEGTEA
LRGVLAAAVV DLLAREDLAN LAVCHAPGCG QFFHRARPNQ RWCSPGCGNR ARVDRHRHRR
ARPAGEGQ