Gene Ksed_14080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_14080 
Symbol 
ID8372916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1455214 
End bp1456815 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content73% 
IMG OID644991682 
Productapolipoprotein N-acyltransferase 
Protein accessionYP_003149200 
Protein GI256825240 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0815] Apolipoprotein N-acyltransferase 
TIGRFAM ID[TIGR00546] apolipoprotein N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0225972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.302193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGCCC TCCTCCAACG CCTTCTCGCC GCAGTGCTGG GGGGAACCCT TCTCTGGCTC 
GCCTTCCCCG ATGCGGGTCT CTGGTGGGCC GCGGCCCCCG GCGTCGCCCT GGTCACCCTG
GCCACCCGCG GCGCCCGCCT CGCCACCGGG GGACTGGTCG GGCTCACCGC GGGCCTGGCC
CTCTTCGTGC CGCTGCTGCG GTGGTCGGGC ATCTACGTGG GCGCCGACGC CTGGCTGGCC
CTGGCCGGCT TCGAGGCGAT CTACCTCATC GGCATGGGCA TCCTGCTGGT GGCCGTGCAG
CGGTGGACCT CCCGCTTCTC GTTGCCGGTC GAGGCCGCGC TGCTCCCGCC GTTGGTCGGG
GCCAGCTGGG TGGTGCAGGA GTGGGTGCGC TCGACCATCC CGTGGGGCGG TTTCTCGTGG
GCCCGGCTGG CCTTTTCGCA GGCCGAGGCC CCCACGCTGG CCGCCGTGCG GTGGGTGACC
TCCGCCGGCC TCAGCGCCTG GGTGGGCGCC ATCGGCGGGC TGCTCGCGGT CACCGCGGTC
TGGGTGGCAC GGCGTGCGCG CACCCGGAAC GAGCCGGTGG CCGTGCCCGT CGGCGCACTG
GCCGCCGCCG GGGTGCTCAC CTTCGGCCCG CTCGTGCTGC CCGTGTCGCC ACCGACCGGC
GCCTCGCTGG ACGTGCTGGC CGTCCAGGGG GACGCCCCGC AGAGCGGTTT CCGGTTCAAC
GAGAACGCCC GGGAGGTGCT CACCAACCAC ACCACGCTGG TGCACCGCGC GGCCGAGGAG
GTCGAGGCGG GGGAGCGCCC CGCACCGGAC GTGGTGTTCC TGCCGGAGAA CGCCTCGGAC
GTGGACCCCA CCCGCGACGA GGAGGCCGCC GGTCTGCTGG CGGAGGCCAG CTGGGCCATC
GACACCCCGA TGCTGGTGGG CGCGATCCTG CGCGAGCCCA GCCCGATGGT GTCGAACTCG
GTGCTGCAGT ACCTGCCCGG ACAGGGCCCG GTGGCCCGCT ACGACAAGCA GCACCCGGTG
CCCTTCGGCG AGTGGATCCC ACACCGCGAC CTGTTCCGCC GCATCACACC CAAGGTCGAC
CTGGTGCCCC GGGACTTCGC GGCCGGTGAC CAGATGGGCG TGATGGACGT GCCCACCGAC
TCCGGCGACC TGCGCGTGGG CATGGGCATC TGCTTCGAGG TGGCCTACGA CGACCTCATG
CGCATCCCCG TGGTGCAGGG CTCCGAGCTC CTGTTCATCC CCACGAACAA CGCGAGCTTC
GGCATCACCG ACCAGTCCAC CCAGCAGCTG GCGATCAGCC GGGTGCGGGC CATGGAGCAC
GCCCGATCGG TGGTGCACAT CAGCACCGTC GGGGTGAGCG CCCTGCTCGG CCCGGACGGC
AGCATCCTCT CCTCCCCGGA CGGTGGTGAG CCGCGCGGGA CCGAGCTGTT CGAGCCGGCC
CTGTTGTCCG CCTCGGTGCC GCTGAACGAC GGGCTCACCC TGGCCACCCG GTTGGGCAAT
TGGCCCACCT GGGTGCTGGC CGCCCTCGTG CTGCCCGCCG GGGTCGCGGG ACTGCTACCG
CCCTCAACCC GCCGGGGGAG GGCCGCGGAG GAGCGGGCAT GA
 
Protein sequence
MVALLQRLLA AVLGGTLLWL AFPDAGLWWA AAPGVALVTL ATRGARLATG GLVGLTAGLA 
LFVPLLRWSG IYVGADAWLA LAGFEAIYLI GMGILLVAVQ RWTSRFSLPV EAALLPPLVG
ASWVVQEWVR STIPWGGFSW ARLAFSQAEA PTLAAVRWVT SAGLSAWVGA IGGLLAVTAV
WVARRARTRN EPVAVPVGAL AAAGVLTFGP LVLPVSPPTG ASLDVLAVQG DAPQSGFRFN
ENAREVLTNH TTLVHRAAEE VEAGERPAPD VVFLPENASD VDPTRDEEAA GLLAEASWAI
DTPMLVGAIL REPSPMVSNS VLQYLPGQGP VARYDKQHPV PFGEWIPHRD LFRRITPKVD
LVPRDFAAGD QMGVMDVPTD SGDLRVGMGI CFEVAYDDLM RIPVVQGSEL LFIPTNNASF
GITDQSTQQL AISRVRAMEH ARSVVHISTV GVSALLGPDG SILSSPDGGE PRGTELFEPA
LLSASVPLND GLTLATRLGN WPTWVLAALV LPAGVAGLLP PSTRRGRAAE ERA