Gene Ksed_13940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13940 
Symbol 
ID8372902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1440490 
End bp1441629 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content74% 
IMG OID644991668 
ProductZn-dependent protease 
Protein accessionYP_003149186 
Protein GI256825226 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.909069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGT CCTCCGGATG GCGCATCGGC AGTGTCCGCG GCGTCCCGGT CTACCTCGGA 
CGCACCTGGC CGCTGCTGGT CATCCTGGTG GTGGTGCTCA ACGGCACCCA GCTCACCGCC
AGCCTCGGGG CGCCCACGGC CTACGGGCTC GGATTGGCCT ACGCGGTCAT GCTGGTGTTC
AGCGTCTTCG TCCACGAGCT CGGGCACGTG CTGGTGGCCC AGTGGCGGGG CTACACCGTC
ACCCAGGTGC AGCTCGACCT CATCGGGGGG CACACCGCCC ACCAGTCCGA CAACACCAGC
CCCGGCAGCA ACGCGCTGGT GGCCGTCGCC GGGCCGCTGG CCAACCTCGT CCTCGCCGCC
ATCGCCCTCG GCCTGTGGTT CGTCGTCCCC GACGGCCTGG GCCACATGGT GGTGGCCAGC
GCGGTCTGGG TGAACGCCCT GGTGGGCGTG TTCAACCTGC TGCCGGGCAT GCCCCTGGAC
GGCGGCCACG TGGTGGACTC GCTGGTGTGG AAGGCCACCG ACAGCCGTCC TGCCGGGCTC
ATCGCCGCGG GCTGGAGCGG TCGGCTGATC GCCGCCCTCG TGATCGCCTT CATCGCCTGG
CAGATGGCCA CCGGGGGGTC CCTGGTCTTC CTGCTCTGGG GCGGGCTCAT CGCCTGGATC
CTGTGGGCCG GGGCCAGCCG CTCCATCCAG GCCGGCACCG CCCGCCGCGA GCTGGGCCGT
CACACCACGG CCTCGGTGAT GCGGCCGGCC GTCGGCATCC CGCAGGACGC GCCCGTGGCC
ACTCTGCTGC AGGTCCGCGG CTTCCCGGTG CCGGTCACCG TGGTCACCAC CGATGCCGAG
CACCGCGCGG TCGGCCTGGT GGACCCCTCG GCGCTGGCGC AGGTGCCCGC CGAGGTGCGT
GACTCCACGC CGCTGTCGGC CGTCGCGCGC ACCGTCCCGG GGGACTGGAC CGTGGACGCC
GCCCCGCAGG AGGACATCAC CCGTCTCATC GAGGCCGTCC TCGGCCGGGA GCTCACCCTG
GCGGCGATCC GCCAGCCGGG GGTGCAGCAG CCTGACGGCC GCCAGGGGCC GCCCCAGATC
GTCGGGCTGG CCGACCACGC CTCGCTCGAT GCGGGGATGC GCGCCAACAC CGGTCCGTAG
 
Protein sequence
MPQSSGWRIG SVRGVPVYLG RTWPLLVILV VVLNGTQLTA SLGAPTAYGL GLAYAVMLVF 
SVFVHELGHV LVAQWRGYTV TQVQLDLIGG HTAHQSDNTS PGSNALVAVA GPLANLVLAA
IALGLWFVVP DGLGHMVVAS AVWVNALVGV FNLLPGMPLD GGHVVDSLVW KATDSRPAGL
IAAGWSGRLI AALVIAFIAW QMATGGSLVF LLWGGLIAWI LWAGASRSIQ AGTARRELGR
HTTASVMRPA VGIPQDAPVA TLLQVRGFPV PVTVVTTDAE HRAVGLVDPS ALAQVPAEVR
DSTPLSAVAR TVPGDWTVDA APQEDITRLI EAVLGRELTL AAIRQPGVQQ PDGRQGPPQI
VGLADHASLD AGMRANTGP