| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_13890 |
|---|
| Symbol | |
|---|
| ID | 8372897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 1435852 |
|---|
| End bp | 1437168 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644991663 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_003149181 |
|---|
| Protein GI | 256825221 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase
[TIGR03447] cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.0162649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.816908 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATTCCT GGACCTCACC TGACGTGCCC GCCCTGCCCT TCACCGCCGA GGGCCCCCGG
GTCCACGACA CCGCGCGCGG CGCGATCACC CCGCTAACCC CGCGCCCGGG GCAGGAGGCG
GGGCTCTACG TCTGCGGGAT CACCCCCTAC GACGCCACGC ACCTGGGCCA CGCCGCCACC
TACCTCACCT TCGACCTGGT GAACCGGGCC CTGCGGGCCG CGGGCCACCC GGTGCGCTTC
GTGCAGAACG TCACCGACGT GGACGAGCCC CTGCTCGAGC GCGCCGAGCG CGACGGGGTG
CACTGGGAGG AGCTCGCCTC CCGCGAGATC CAGCTCTTCC GCGACGACAT GGCGGCGCTG
CGCATCATCG CGCCTGACGC CTACGTCGGT GCGGTGGAGG GCATCCCCTC CGACGTCGCC
GCCATCCGGG CCATGCTCGA GTCCGGCCGC GCCTACCGGG TGCCCGCCGA GGACGCCGCG
GCCGATGCGG GGGAGTCACC GGCCGATGTG TACCTCGACC TGGCGCAGGT GCCCACCTTC
GGTGAGGTCT CGCACTGGAC CCCCACGCAG ATGATGGAGG TCTTCGCCGA CCGTGGCGGT
GACCCCGACC GCGCCGGCAA GCGCGACCGG CTCGACCCCC TGCTGTGGCG CGCCCACCGG
GAGGGCGAGC CACACTGGGA GGGCGGCAGC CTGGGGGCGG GGCGCCCCGG CTGGCACATC
GAGTGCACCA CCATCGCGCG CGACCACCTG GGCACCCCCT TCCTCGTGCA GGGCGGTGGG
GACGACCTGG TCTTCCCGCA CCACGAGATG AGCGCCGCCC AGACGCGTGC CCTCACCGAC
GATGCCTTCG CCGAGCACTA CGTCCACCAG GCGATGGTGG GCCTCGACGG CGAGAAGATG
AGCAAGTCCA AGGGCAACCT GGTGCTCGTC TCGCGGCTGC GGGCCGCGGG GGAGGACCCG
GCCGCCATCC GGCTGGCCCT GCTCTCGCAG CACTACCGCA CGGCCTGGGA GTGGACCGAC
GCCCACCTCG AGGCCGCCCG CCAGCGGCTG GACCGCTGGC GCCACGCGGC GCAGACCGCC
ACCGCCTCGC CGTCCACCGC CGATGCGGAG GACGCCCCGG CCGGTGACGC CGTGGCCCGG
CAGCTCGCCG AGCGGATCGC CGACGACCTG GACGCCCCCG GCGCCCTGGC CGTGGTGGAC
CGCTGGGCCG ATGCGGTGCT CGGCGAGCAG ACCGGCGCGG CCGCCGCGGC GGCGCGGGCC
GAGGCCCGTG GCGTGCGCAC GGCCGTGGAC GCCCTGCTCG GCATCGACCT GGGCTGA
|
|---|
| Protein sequence | MDSWTSPDVP ALPFTAEGPR VHDTARGAIT PLTPRPGQEA GLYVCGITPY DATHLGHAAT
YLTFDLVNRA LRAAGHPVRF VQNVTDVDEP LLERAERDGV HWEELASREI QLFRDDMAAL
RIIAPDAYVG AVEGIPSDVA AIRAMLESGR AYRVPAEDAA ADAGESPADV YLDLAQVPTF
GEVSHWTPTQ MMEVFADRGG DPDRAGKRDR LDPLLWRAHR EGEPHWEGGS LGAGRPGWHI
ECTTIARDHL GTPFLVQGGG DDLVFPHHEM SAAQTRALTD DAFAEHYVHQ AMVGLDGEKM
SKSKGNLVLV SRLRAAGEDP AAIRLALLSQ HYRTAWEWTD AHLEAARQRL DRWRHAAQTA
TASPSTADAE DAPAGDAVAR QLAERIADDL DAPGALAVVD RWADAVLGEQ TGAAAAAARA
EARGVRTAVD ALLGIDLG
|
|---|
| |