Gene Ksed_12830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12830 
Symbol 
ID8372791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1324454 
End bp1325200 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content76% 
IMG OID644991560 
Productconserved hypothetical protein TIGR03085 
Protein accessionYP_003149080 
Protein GI256825120 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083
[TIGR03085] conserved hypothetical protein TIGR03085 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.213535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0190582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCTG CTTCCGCGTC CCGTCCCCAG CAGCCGACCG ACCACCGGGC GGCGAGCGAT 
GCCGGTGCAG CAGCTCCTGG CGGCGGCTCC CCGGCCCCGG ACCCGGCCCG ACTCCTGCAG
GCCGAGCGCG AGGCCCTGGT GGCCTCGTTC CGGGAGGCTG GGCCCGATGC ACCCACCCTG
TGTGCCGGCT GGACCACGCG TGACCTCGCG GCCCACCTGG TGGTGCGCGA GGCCCGCCCC
GACGCCCTGC CCGGCATCGG CCTCACCGGT ACCCCCGCCG AGGGCCACAC CGAGAAGGTG
CAGTCCGAGT ACGCCCGCAA GGACTGGGGC ACCCTGCTGG CGCAGTTCTC CCGCGGGCCC
GCCCCGTGGA TGCCCTTCGC CCTGCCGGTC GTGGGCCCCG CCATCAACAT CGCGGAGTAC
GTGGTGCACC ACGAGGACGT GCGGCGCGCC GTGCCGGAGT GGACCGTGCG CCGGGACGAC
GCCCTGCAGC AGGCGGTCTG GCGCACGCTG GTCCGCGCCA GCCGTCTCAC GCACCGCAAG
TCTCCCGTCG GCGTGGTCCT GGTGGCCCCC GGCATCGGGC GCACCGCGGC CAAGCGACCG
CCCGAGGGGC GCGGCACGGT GGTGCTCACC GGGGAGCCGG TGGAGCTGCT CCTGTTCTCC
TTCGGGCGCG AGTCCGTGGC CCGGGTGGAG CTCTCCGGCG ACCCCGGGGA CGTCGAGGCC
CTGCGCTCGC ACCGGCGGGC GCTGTGA
 
Protein sequence
MSPASASRPQ QPTDHRAASD AGAAAPGGGS PAPDPARLLQ AEREALVASF REAGPDAPTL 
CAGWTTRDLA AHLVVREARP DALPGIGLTG TPAEGHTEKV QSEYARKDWG TLLAQFSRGP
APWMPFALPV VGPAINIAEY VVHHEDVRRA VPEWTVRRDD ALQQAVWRTL VRASRLTHRK
SPVGVVLVAP GIGRTAAKRP PEGRGTVVLT GEPVELLLFS FGRESVARVE LSGDPGDVEA
LRSHRRAL