| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_12670 |
|---|
| Symbol | pyrC |
|---|
| ID | 8372775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 1306015 |
|---|
| End bp | 1307355 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644991544 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_003149064 |
|---|
| Protein GI | 256825104 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0696106 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCCAGG GGGCCGACCT CGCCGGCGGC GGGGTGGCCG ACCTGCTCGT GGTGGGCGAC
ACCATCGCGG CCGTCGGCCC GGGGGCCGCC GCCGACGCCC CCGCCGGGAC GCAGCGGGTG
GACGCCGCCG GGCTGGTGGC ACTGCCCGGG CTGGTGGACT TCCACGTGCA CCTGCGCGAG
CCCGGCCGGG AGGACGCCGA GACCGTGGCC ACGGGCTCCC GGGCGGCCGC GGCCGGTGGG
TTCACCGCCG TGCTGGCGAT GGCGAACACC ACGCCGGTGA CGGACACCGC CGAGAAGGCC
GCCCACATCG CGGCCCTGGG CCGGGCCGCC GGGCTGGTGG ACGTCCACCC CGTCGGGGCG
GTGAGCAAGG GCCTGGCCGG GGAGGAGCTC GCGGAGCTCG GGCTGATGGC CCGCTCGGCG
GCGCGCGTGC GCGTCTTCAG CGACGACGGG AAGTGCGTCC ACGACGCCCG CCTGATGCGC
CGCGCGCTGG AGTACCTGCG GGCCCACGAC GGGGTGGTCT CCCAGCACAG CCAGGACCCG
CGGCTGGCCG ACGGCACGGC CTGCTGCCAC GAGGGGGAGC TCTCCGGCCG GCTGGGCCTG
CCGGGCTGGC CCGAGCCCGC GGAGGAGACG ATCATCGCCC GGGACGCGAT GCTGGCGAAG
CACACCGGCG GCCGGGTGCA CGTGGCACAC GTGACCACCG CCGGGGGAGT GGAGGTGGTC
CGCTGGGCCA AGGCCCGGGG CATCCGCATG ACCGCGGAGG TCACCCCGCA CCACCTCGCC
CTGACCACCG ACGCCCTGGC CGGGTACGAC CCCGTGTTCA AGGTGAACCC GCCGCTGCGC
TCCGACGAGC ACGTGACCGC CCTGCACGAG GCACTGGCCG ACGGGACGAT CGATGCCGTG
GCCACCGACC ACGCACCGCA CGCGGCCCAC GACAAGGACC ACGCCTTCGT GGACGCCGCG
TTCGGGATGC TCGGGCTCGA GACCGCCCTG CCGGTGGTCA GCGAGGTCAT GGTCCGCAGC
GGCCTGCTCG GCTGGCAGGA CGTGGCCCGC GTGATGTCCT CGGCCCCGGC TCGCATCGCC
CGCCTCGACG AGCTGCCCGG CACCTCCCGG CACGGGGCCG GCCTCGTGGC CGGCGCACCG
GCGCACCTGA CCCTCGTGGA CCCGTCCGCC GCGGTGACGG TGGACCGCGA GGAGTCGTAC
TCGCGCTCCC GGAACAACCC CTGGCACGGC CAGACCTTCC ACGGCCAGGT GCGCGCGACG
CTGCGCGCCG GCCGCGTGAC CCACTCCCTG CTGGACGCGC TCCCGGCGTC CGTCGACCCC
ACCCGTGAGG ACGCCGCATG A
|
|---|
| Protein sequence | MIQGADLAGG GVADLLVVGD TIAAVGPGAA ADAPAGTQRV DAAGLVALPG LVDFHVHLRE
PGREDAETVA TGSRAAAAGG FTAVLAMANT TPVTDTAEKA AHIAALGRAA GLVDVHPVGA
VSKGLAGEEL AELGLMARSA ARVRVFSDDG KCVHDARLMR RALEYLRAHD GVVSQHSQDP
RLADGTACCH EGELSGRLGL PGWPEPAEET IIARDAMLAK HTGGRVHVAH VTTAGGVEVV
RWAKARGIRM TAEVTPHHLA LTTDALAGYD PVFKVNPPLR SDEHVTALHE ALADGTIDAV
ATDHAPHAAH DKDHAFVDAA FGMLGLETAL PVVSEVMVRS GLLGWQDVAR VMSSAPARIA
RLDELPGTSR HGAGLVAGAP AHLTLVDPSA AVTVDREESY SRSRNNPWHG QTFHGQVRAT
LRAGRVTHSL LDALPASVDP TREDAA
|
|---|
| |