Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_12390 |
Symbol | |
ID | 8372747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1271284 |
End bp | 1273239 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644991516 |
Product | DNA repair protein RecN |
Protein accession | YP_003149036 |
Protein GI | 256825076 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.00374737 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.634901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAGGC CACGGGACGC GACGAACAGC ACGCACCGGG ACGGGCCGGG CACCGAGCAG TCCGAGCCCT GGCTGTCCAC CGTCGAGATC TCCAACCTCG GCGTCATCCA CGATGCGACG GTCGACCTCT CGCGGGGCCT GACGGTGATC ACTGGGGAGA CCGGTGCCGG CAAGACGATG ATGGTGCAGA GCCTCTCGCT GCTGCTGGGG CGTCGTGCCG AGTCCGGCTG GGTGCGCCAC GGGGCGGACT CGGCGGTGGT GACCGGCGTG TACGAAGTGC CCCCGGGTCA GACGGACCAC CCTGCCCTGC GTGCGGTGGA GGACGCCGGC GGCGTGGTGG AGGACGAGCT GATCGTCACC CGGAGGGTCA GTGCCGCAGG CCGTTCCGTG GCCGCAGCCG GCGGGACGCG GATGCCCGTG CGCACCCTGG CCGGCATCAG TGAACTCCTC GTGGCCATCC ACGGTCAGGC CGACCAGTGG CGGTTGCTCT CGGCGGACGC GCACCGCGAG GTGCTTGACG CGTTCGGGGG TGAACCTGTG ACCGAGCGTC TGACTGCGTA CCGCGAGGCC CGGCGAGTCG TGGTGGACCT CGACCGCACA GTGAGGGATT TCGACACCGA GCGCACGATC CGCGCACAGC GGGCGGCGTG GCTCCGCAAG GGCCTGGATC TCCTGGCCTC CGTGGACCCG TCGCCGGGCG AGGAGGACGA GCTCCGGGAG CGGGTGGCGC GGCTGGACCA CGCGGCAGAC CTGGTGGAGG CGGGCCACCT CGCCGCGGGA GCGCTGTCGG GGGACGCCAC CAGTGCGATG CCCGAGCCCG GGGCGACCGA GCTGATCGGG CAGGCGCGGG CCGCCCTGGA GCGCGTGGCC CACGTGGACG CCGAGACCGG GGAGCTGTAC CGACGTCTGC AGGAGCTGGG CCTGCTCGCC CACGACCTCG CGGCAGACCT CTCGTCATGG GTGGGCGGTC TGGACCTGGA CCCCGGGGAG TTGCAGACCC TGCACGAACG GCGGGCGGCA CTGCGCTCCT TGGCGCAGGA GTTCGGGCGC CCGGAGCTGC TGCCCGAGGG AGACGCCCAG TATGACCGTC GACCAGAGGG TGAGGGCTCG TCCGGCGGCG CTGTCGCGCG GGGGAGTGAG GGTGACGCCG ATGAGCATGC CGCGGCCACG ATGACGGAAC ACGCCAAGCC CGCGTCGGAC CAGCTCGCAC CGGCGACGGA CCACGCCACG CCCACGGCGG ACCGCGCCCT GGCCTGGGGG GTGATCGCGG CGCAGGAGCT CGAGGGCCTG GGCACGTCGG ACGAGGACCG CGAGGCGCTG GTCGGCGAAC TTGAGCAGGC CAAGCAGGCC GCGCGCGCTG CGGCAGACGC CCTCACTGCC GCACGGCGTG CCGCGGCGGT GGAGTTGGGG GACCGGGTCA CCCAGGAGGT GCAGGCCCTG GCCATGCCCA AGGCGGTGGT GACCGTGGCG GTGGAGGAGG CCCGGCCGGG TGCCCATGGC GCCGACGCGG TGGAGATCCG CATGGCGCCG AACCGCGGGG TGCCCGCGCG CACGGTCGCC AAGGCGGCTT CGGGCGGTGA GCTGAGCCGC TTGATGCTGG CGCTGGAGGT CGTGGTCGGG GACGCCGAGG GCGGCGTGCC CACCATGGTC TTCGACGAGG TCGATGCCGG CGTCGGGGGA GAGGCCGCCC ACGCCATCGG GGCGCGGCTG GCCCGCATCG CCCGGGAACG ACAGGTCGTG GTGGTCACCC ACCTGCCCCA GGTGGCGGCC TACGCGGACC GGCACCTGGT CATCGCCAAG TCCGATGACG GGTCGGTCAC CACCTCGGGC GTCGCTGCCG TCGAGGACGA GGAGCGGCTC GCGGAGCTGG CCCGCATGCT CGGCGGGGTC TCGGAGAGCC GCAGCGCCCG GGAGCACGCG GCGGAGCTGG TGGAGGCGGC CCGGAGCCGC CGCTGA
|
Protein sequence | MKRPRDATNS THRDGPGTEQ SEPWLSTVEI SNLGVIHDAT VDLSRGLTVI TGETGAGKTM MVQSLSLLLG RRAESGWVRH GADSAVVTGV YEVPPGQTDH PALRAVEDAG GVVEDELIVT RRVSAAGRSV AAAGGTRMPV RTLAGISELL VAIHGQADQW RLLSADAHRE VLDAFGGEPV TERLTAYREA RRVVVDLDRT VRDFDTERTI RAQRAAWLRK GLDLLASVDP SPGEEDELRE RVARLDHAAD LVEAGHLAAG ALSGDATSAM PEPGATELIG QARAALERVA HVDAETGELY RRLQELGLLA HDLAADLSSW VGGLDLDPGE LQTLHERRAA LRSLAQEFGR PELLPEGDAQ YDRRPEGEGS SGGAVARGSE GDADEHAAAT MTEHAKPASD QLAPATDHAT PTADRALAWG VIAAQELEGL GTSDEDREAL VGELEQAKQA ARAAADALTA ARRAAAVELG DRVTQEVQAL AMPKAVVTVA VEEARPGAHG ADAVEIRMAP NRGVPARTVA KAASGGELSR LMLALEVVVG DAEGGVPTMV FDEVDAGVGG EAAHAIGARL ARIARERQVV VVTHLPQVAA YADRHLVIAK SDDGSVTTSG VAAVEDEERL AELARMLGGV SESRSAREHA AELVEAARSR R
|
| |