Gene Ksed_11700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11700 
Symbol 
ID8372678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1198215 
End bp1199345 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content73% 
IMG OID644991448 
ProductDnaJ-class molecular chaperone with C-terminal Zn finger domain 
Protein accessionYP_003148974 
Protein GI256825014 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID[TIGR02349] chaperone protein DnaJ 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.482497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.776802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACT ACTACGAGAT CCTCGGAGTC TCCCGCGACG CCACCGCGGA GGACATCAAG 
CGTGCCTACC GCAAGAAGGC CCGCCACCTG CACCCGGACG TCGCGCCGGG CAAGGAGGAC
GAGTTCAAGC TCGTCGGGCA GGCCTACGAC GTGCTGGGCG ATGCGGACAA GCGCATGGCC
TACGACCGCG GGGCCGACCC GTACGGGGAC CCGACCGCGG GCTTCGGCGG CGCTGCCGGT
GGGGCGTTCA CCTTCAGCGA CATCATGGAC GCCTTCTTCG GCGGGCAGGG CGCCACCGCG
GGGCCGCGTT CCCGGCAGCA GCCCGGTCAG GACGCCCTGG TGCGCCTGGA CGTCCCGCTG
CGCACGGCCG TGTTCGGCAA CACCGAGGAG CTCACCGTGG AGACCGCGGT GCTGTGCTCC
ACCTGCGACG GCGCCGGCGC CTCGCCGGGC ACCGGTACGC GCACCTGCGA CGTCTGCCGC
GGCCAGGGCC ACGTCCAGCA GGTGCAGCGC TCCTTCCTGG GCCAGGTCAT GACCACGCGC
CCCTGCGGCG CCTGCCAGGC CACCGGCGAG ATCATCGAGA ACCCCTGCAC CGACTGCCGG
GGCGACGGCC GGGTGCGGGA GCGCCGCACG CTCAAGGTCA AGGTGCCCGC CGGCGTCGAC
ACCGGCACCC GCATCCAGCT GGCGGGCCAG GGCGAGGTCG GCCCCGGCGG CGGCCCGGCC
GGCAGCCTCT ACGTCGAGGT CAACGTGCTG GCGGACGACA CGTGGACCCG TGAGGGCGAC
GACCTGCACT GTTCCGTGGA GCTGCCGATG ACGGCCGCTG CCCTGGGTAC CGAGGCCCAG
GTGGAGACCT TCGACGGCAC CGAGAAGGTG GACATCCCGG CCGGCACCCA GCACGGCGCC
GTGTTCACCC TCCGGGGTCT GGGCGTGGGG CACCTGCGCC GGGACGGCCG CGGCGACCTG
CACGTGCATG CCAACGTGGT CACGCCGACC CGCCTGGACG GCCGCCAGAA GGACCTGCTG
CGCGAGCTCG CGTCGCTGCG CGGTGAGGAG CAGGCCACCG GCACCGTCAC CTCCATGGAC
CAGCACGGGG GCTTCTTCGG ACGCCTGCGG GACGCCTTCT CGGGCCGCTG A
 
Protein sequence
MNDYYEILGV SRDATAEDIK RAYRKKARHL HPDVAPGKED EFKLVGQAYD VLGDADKRMA 
YDRGADPYGD PTAGFGGAAG GAFTFSDIMD AFFGGQGATA GPRSRQQPGQ DALVRLDVPL
RTAVFGNTEE LTVETAVLCS TCDGAGASPG TGTRTCDVCR GQGHVQQVQR SFLGQVMTTR
PCGACQATGE IIENPCTDCR GDGRVRERRT LKVKVPAGVD TGTRIQLAGQ GEVGPGGGPA
GSLYVEVNVL ADDTWTREGD DLHCSVELPM TAAALGTEAQ VETFDGTEKV DIPAGTQHGA
VFTLRGLGVG HLRRDGRGDL HVHANVVTPT RLDGRQKDLL RELASLRGEE QATGTVTSMD
QHGGFFGRLR DAFSGR