Gene Ksed_09480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_09480 
Symbol 
ID8372457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp971493 
End bp972158 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content73% 
IMG OID644991229 
ProductABC-type antimicrobial peptide transport system, ATPase component 
Protein accessionYP_003148759 
Protein GI256824799 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.31196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.583973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC GCGCCGGGTG GGACAGCCCG CCCCGGCTGG AGGCACGCGC ACTGTCCTTC 
GGCTACACGC CGCAGGAGCC GCTCCTCCAG GAGTGGGACG CGGCCTTCGA GGCCGGGTCG
ATGACGGCGC TCACCGGACC GTCCGGGCGG GGGAAGTCGA CGCTCATGTA CCTGCTGGGC
CTGATGCTGC GGCCCTCCTC CGGTGCCATC CTGCTGGACG GCGTCGATGC GGTGCCGCGC
AAGGACGCCG AGTTGGCCCG TCTGAGGGCC GAGAGGTTCG GCTTCGTCTT CCAGGACGCG
GCCCTGGACA CCACGCGGAC GGTGCTGGAC AACGTCACCG AGACCGCGCT CTACCGCGGG
GTCGCCCGCA GCACCGTGAG CGGCGCAGCG CGCGAGCTCA TGGAGCGATT CGGGGTCGAC
CTGCCCCCGG AGCGCAAGCC GGGGCAGGTG TCGGGCGGGC AGGCGCAGCG CATCGCCCTG
TGCCGGGCGC TGCTCAACCA GCCGTCGGTG CTGCTGGCCG ACGAGCCCAC CGGAAACCTG
GATCCCGCGA GCAGCGGGGT CGTAGTGGAC GCCCTACGTC AGCACGCCTC GCGTGGGGCG
GCGGTCGTCC TCGTCACGCA CTCCCCGGAG CTCGCGGCGG CCTGCGACCG GGAGATTCGG
TTGTGA
 
Protein sequence
MSTRAGWDSP PRLEARALSF GYTPQEPLLQ EWDAAFEAGS MTALTGPSGR GKSTLMYLLG 
LMLRPSSGAI LLDGVDAVPR KDAELARLRA ERFGFVFQDA ALDTTRTVLD NVTETALYRG
VARSTVSGAA RELMERFGVD LPPERKPGQV SGGQAQRIAL CRALLNQPSV LLADEPTGNL
DPASSGVVVD ALRQHASRGA AVVLVTHSPE LAAACDREIR L