Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_09480 |
Symbol | |
ID | 8372457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 971493 |
End bp | 972158 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644991229 |
Product | ABC-type antimicrobial peptide transport system, ATPase component |
Protein accession | YP_003148759 |
Protein GI | 256824799 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 0.31196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.583973 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCC GCGCCGGGTG GGACAGCCCG CCCCGGCTGG AGGCACGCGC ACTGTCCTTC GGCTACACGC CGCAGGAGCC GCTCCTCCAG GAGTGGGACG CGGCCTTCGA GGCCGGGTCG ATGACGGCGC TCACCGGACC GTCCGGGCGG GGGAAGTCGA CGCTCATGTA CCTGCTGGGC CTGATGCTGC GGCCCTCCTC CGGTGCCATC CTGCTGGACG GCGTCGATGC GGTGCCGCGC AAGGACGCCG AGTTGGCCCG TCTGAGGGCC GAGAGGTTCG GCTTCGTCTT CCAGGACGCG GCCCTGGACA CCACGCGGAC GGTGCTGGAC AACGTCACCG AGACCGCGCT CTACCGCGGG GTCGCCCGCA GCACCGTGAG CGGCGCAGCG CGCGAGCTCA TGGAGCGATT CGGGGTCGAC CTGCCCCCGG AGCGCAAGCC GGGGCAGGTG TCGGGCGGGC AGGCGCAGCG CATCGCCCTG TGCCGGGCGC TGCTCAACCA GCCGTCGGTG CTGCTGGCCG ACGAGCCCAC CGGAAACCTG GATCCCGCGA GCAGCGGGGT CGTAGTGGAC GCCCTACGTC AGCACGCCTC GCGTGGGGCG GCGGTCGTCC TCGTCACGCA CTCCCCGGAG CTCGCGGCGG CCTGCGACCG GGAGATTCGG TTGTGA
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Protein sequence | MSTRAGWDSP PRLEARALSF GYTPQEPLLQ EWDAAFEAGS MTALTGPSGR GKSTLMYLLG LMLRPSSGAI LLDGVDAVPR KDAELARLRA ERFGFVFQDA ALDTTRTVLD NVTETALYRG VARSTVSGAA RELMERFGVD LPPERKPGQV SGGQAQRIAL CRALLNQPSV LLADEPTGNL DPASSGVVVD ALRQHASRGA AVVLVTHSPE LAAACDREIR L
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