Gene Ksed_08580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08580 
Symbol 
ID8372367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp871238 
End bp872641 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content72% 
IMG OID644991142 
Productpyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component 
Protein accessionYP_003148677 
Protein GI256824717 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR03452] mycothione reductase 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.745964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTG AGCACTACGA CCTCGTCATC ATCGGATCGG GCTCGGGCAA CTCCGTGCCC 
CAAGCCGACC ACGCCGACCT GCGGGTGGCC GTGGTGGAGG GCGGGGTGTT CGGGGGGACG
TGCCTGAACA ACGGGTGCAT CCCCACCAAG ATGTTCGTGT GGGCCGCGGG CATCGCAGAC
ACGGTGCGTG ACAGCGAGCG CTTCGGCATC GACGCCGAGC TGCGGGGTGT GCGTTGGCAG
GACGTCCGCG ACCGGGTGTT CTCCCGCATC GACCCGATCA GCGCCGGTGG CGCCGAGTAC
CGCCGCACCG CCGCGGGGAC GGACTTGTAC GAGGGGTGGG CCCGGTTCAC CGGCGAGCGG
GAGCTCGAGG TTGCCCTGCG CGATGGGAGC ACGGCGCGGC TCACCGCCGA CCAGGTGGTC
ATCGCCACCG GGGCCTCCCC CTTCGTGCCC CCCGCCCTGA AGCCGCTGAT GGACTCGGTA
GCGCACACGA ACCGCAGCAT CATGCGACTG GAGGATCGGC CCGAGCACCT CACCATCATC
GGGGGCGGGG TGGTGGCCGT GGAGTTCGCG CACATCTTCG GGTCCCTCGG GTCCCGGGTG
ACCCTGCTGG TGCGCGGCGA CCAGCTGCTC AAGGATCTGC CCGAGGAGCT CGCGGAGCGC
TTCGGCGAGA TCGCCGCCCG CACCTGGGAC GTGCGCTTCG GCACCGAGGT GGCGGCGGCC
CACGAGCAGG ACGGGGGGGC AGTCCTGGAG CTCGACGACG GCAGCACCCT GCGGACCGAC
GGCGTGCTGG TGGCCACCGG CCGGCGCCCG AACACCGCGG CCCTGGGGCT CGAGGACGCG
GGGGTGGAGA CCGATGGTCG GGGCTTCGTC GTGACCGACG CCCACGGACG CACGAGTTCC
CCAGGGGTGT GGGCGCTGGG CGACGTGCGC GACCCGGTCA TGCTCAAGCA CGTCGCGAAC
GCCCAGGCCC GGGTGGTCTC CCACAACCTG ACGCGCCCGG ACGACCTGCG GGAGTTCCCC
ACCGTGCCGG TGGTGGCCGG TGTGTTCTCC CACCCGGAGA TCGGGGTGGT CGGCCTGTCG
GCGCAGGAGG CGCGGGACGC CGGGCACCGC GTGGTGTTCC ACGAGCAGGA GTACGCGAGC
GTGGCCTATG GCTGGGCCAT GGAGGACACC CAGGGACGGT GCGGGGTGGT CGCCGACGCC
GACTCCGGCG CGGTGCTGGG CGGCTGGGTG ATGGGTCACC AGGCCGCCAC CCTGGTGAAC
TTGCTGGGCG AGGCGATCCT CAGCGGCGAG CACGCCCACG CGTGGGCCCG TGGCCGCTAC
TGGCCCCACC CGGCCCTGTC GGAGGTGGTG GTGAACGCGC TGCTGTCCCT GGCGCTCCAG
GAGCCGCAGG AGCCCACCAC CTGA
 
Protein sequence
MNAEHYDLVI IGSGSGNSVP QADHADLRVA VVEGGVFGGT CLNNGCIPTK MFVWAAGIAD 
TVRDSERFGI DAELRGVRWQ DVRDRVFSRI DPISAGGAEY RRTAAGTDLY EGWARFTGER
ELEVALRDGS TARLTADQVV IATGASPFVP PALKPLMDSV AHTNRSIMRL EDRPEHLTII
GGGVVAVEFA HIFGSLGSRV TLLVRGDQLL KDLPEELAER FGEIAARTWD VRFGTEVAAA
HEQDGGAVLE LDDGSTLRTD GVLVATGRRP NTAALGLEDA GVETDGRGFV VTDAHGRTSS
PGVWALGDVR DPVMLKHVAN AQARVVSHNL TRPDDLREFP TVPVVAGVFS HPEIGVVGLS
AQEARDAGHR VVFHEQEYAS VAYGWAMEDT QGRCGVVADA DSGAVLGGWV MGHQAATLVN
LLGEAILSGE HAHAWARGRY WPHPALSEVV VNALLSLALQ EPQEPTT