Gene Ksed_07390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_07390 
Symbol 
ID8372248 
TyperRNA 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp741107 
End bp744192 
Gene Length3086 bp 
Protein Length 
Translation table 
GC content55% 
IMG OID644991025 
Product23S ribosomal RNA 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.170063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.154032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TGTCAAGTTT TTAAGGGCAC ATGGTGGATG CCTTGGCATC AGAAACCGAT GAAGGACGTG 
AGAATCTGCG ATAAGCCTCG GGTAGTCGAT AACTAGACGT TGATCCGAGG ATTTCCGAAT
GGGGCAACCC GGCTGGAGGC AAGTCCAGTC ACCGCTACCT GAATATATAG GGTAGAGGGA
GGGAACGTGG GGAAGTGAAA CATCTCAGTA CCCACAGGAA GAGAAAACAA AAGTGATTCC
GTGAGTAGTG GCGAGCGAAA GCGGATGAGG CTAAACCGTG CACGTGTGAT ACCTGGTAGG
GGTTGCGTGT TCGGGGTTGT GGGATGGACA TTTCTGGGGT CTACCAGCCC TGGGGACAGT
AAGAAATGTT GGTGGTAGTC GAACGGTCTT GAAGGGCCGG GCATAGAGGG TGCGACCCCC
GTAGACGAAA CTGCTGGCAC TGTCTGTGTC TTTTCCCGAG TAGCACGGGG CCCGTGAAAT
CTCGTGTGAA TCTGCCGGGA CCACCCGGTA AGCCTAAATA TTCTCTGATG ACCGATAGCG
GACAAGTACC GTGAGGGAAA GGTGAAAAGT ACCCCGGGAG GGGAGTGAAA TAGTTCCTGA
AACCATGTGC CTACAATCCG TTGGAGCCTG TAAGGGTGAC AGCGTGCCTT TTGAAGAATG
AGCCTGCGAG TTAGTGCTCA GTGGCAAGGT TAACCCGTGT GGGGAAGCCG TAGCGAAAGC
GAGTCCGAAG AGGGCGTTTG AGTCGCTGGG TCTAGACCCG AAGCGGAGTG ATCTACCCAT
GGCCAGGTTG AAGCGCCGGT AAGACGGCGT GGAGGACCGA ACCCACTTAG GTTGAAAACT
GAGGGGATGA GCTGTGGGTA GGGGTGAAAG GCCAATCAAA CTCCGTGATA GCTGGTTCTC
CCCGAAATGC ATTTAGGTGC AGCGTCACGT GTTTCTTGCC AGAGGTAGAG CTACTGGATA
GCTGATGGGC CCCACCGGGT TACTGACGTT AGCCAAACTC CGAATGCTGG TAAGTGAAGC
GTGGCAGTGA GACTGCGGGG GATAAGCTTC GTAGTCGAGA GGGAAACAGC CCAGATCACC
AACTAAGGTC CCTAAGCGTG TGCTAAGTGG GAAAGGATGT GGAGTTGCTG TGACAACCAG
GAGGTTGGCT TAGAAGCAGC CACCCTTTAA AGAGTGCGTA ACAGCTCACT GGTCAAGTGA
TTCCGCGCCG ACAATGTAGC GGGGCTCAAG CACACCACCG AAGTTGTGGC AATGCCCATT
TTTGGGTGTT GGGTAGGGGA GCGTCGTGCA GCGAGTGAAG CGGCGGAGTG ATCCAGTCGT
GGATGCTGCA CGAGTGAGAA TGCAGGCATG AGTAGCGAAA GACGGGTGAG AAACCCGTCC
GCCGAATAAC CAAGGGTTCC AGGGTCAAGC TAATCTGCCC TGGGTAAGTC GGGACCTAAG
GCGAGGCCGA CAGGCGTAGT CGATGGACAT CCGGTTGATA TTCCGGAACC GGCGAAGGAC
CGCCCCTGGC GAGGCTGTGG ATGCTAACCG TGTGATCACC TCTGATCGGC ACTTTGTGTC
GTGATGAGTG TGTGAGCCCG GGACCCGAAG CAGTAGTAGC CAAGCGATGG AGAGACGCAA
GAAGGTAGCT GCAGCGTGGC GATGGTAGTC CACGTCCAAG GGTGTAGGGC GACGTCTAGG
CAAATCCGGA CGTCATGTGC CTGAGACCTG ATAGTGACCG CGTATGCGGG AAGTCAGTGA
TCCTATGTTG CCGAGAAAAT CTTCTAGCGA GGTTCTAGCC GCCCGTACCC CAAACCGACT
CAGGTGGTTA GGTAGAGAAT ACCAAGGCGA TCGAGTGAAT CGTGGTTAAG GAATTCGGCA
AAATACCCCC GTAACTTCGG GAGAAGGGGG GCCTGATCCG TGAAACCACA TGCTGGTGGC
AGCGGTGATG GCCGCAGAGA CCAGGGAGAA GCGACTGTTT ACTAAAAACA CAGGTCCGTG
CGAAGTCGCA AGACGATGTA TACGGACTGA CGCCTGCCCG GTGCTGGAAG GTTAAGGGGA
CGAGTCAACC CGTAAGGGTG CAGCTCTGAA CTTAAGCCCC AGTAAACGGC GGTGGTAACT
ATAACCATCC TGAGGTAGCG AAATTCCTTG TCGGGTAAGT TCCGACCTGC ACGAATGGCG
TAACGACTTC TCCACTGTCT CAACCACGAA CTCGGCGAAA TTGCACTACG AGTAAAGATG
CTCGTTACGC GCAGCAGGAC GGAAAGACCC CGGGACCTTT ACTACAGCTT GGTATTGGTA
TTCGGTGCGG CTTGTGTAGG ATAGGTGGGA GACTGTGAAG CACACGCGCC AGCGTGTGTG
GAGTCATCGT TGAAATACCA CTCTGGTCGC TCTGGATATC TAACTTCGGT CCGTGATCCG
GATCAGGGAC AGTGCCTGGT GGGTAGTTTA ACTGGGGCGG TTGCCTCCCA AAGGGTAACG
GAGGCGCTCA AAGGTTCCCT CAGCCTGGTT GGTAATCAGG TGTTGAGTGC AAGTGCACAA
GGGAGCTTGA CTGTGAGACG GACATGTCGA GCAGGGACGA AAGTCGGAAC TAGTGACCCG
ACGGTGGATT GTGGAATCGC CGTCGCTCAA CGGATAAAAG GTACCCCGGG GATAACAGGC
TGATCCTGCC CAAGAGCTCA TATCGACGGC ATGGTTTGGC ACCTCGATGT CGGCTCGTCG
CATCCTGGGG CTGGAGTAGG TCCCAAGGGT TGGGCTGTTC GCCCATTAAA GCGGTACGCG
AGCTGGGTTT AGAACGTCGT GAGACAGTTC GGTCCCTATC CGCTGCGCGC GCAGGAAACT
TGAGAAGGGC TGTCCCTAGT ACGAGAGGAC CGGGATGGAC GAACCTCTGG TGTGTCAGTT
GTTCCGCCAG GAGCACCGCT GATTAGCTAC GTTCGGAAGT GATAACCGCT GAAAGCATCT
AAGCGGGAAG CACGCTTCAA GATGAGGTTT CCATGCCCCT TAGGGGTGAG AGGCTCCCAG
CTAGACTACT GGGTTGATAG GCCGGATGTG GAAGCACAGA AATGTGTGGA GCTGACCGGT
ACTAATAAGC CGACAACTTG CTACAA
 
Protein sequence