Gene Ksed_04660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_04660 
Symbol 
ID8371975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp462777 
End bp463958 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content73% 
IMG OID644990760 
ProductMajor Facilitator Superfamily transporter 
Protein accessionYP_003148303 
Protein GI256824343 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGTC CCGTCCTCAC CTCCGCCCCG CAGGTGGCGG CCCTGTTCGT CATCAACGGG 
TTCATGATCG GCATCTGGGG TGGTCTGCTC GCGAGCCTGC GGGACCGCAT CGGCATCCAC
GAGGGGGACG TCTCCATCCT GCTGGTCACG GTCGGGTTCT CCGCAGCCGT GACCATGCAG
ATCTCCGGCC GGCTGGCCGA CCGCATCGGA GCCCGACGTC CCACCATCGT CGGCGCCGTC
GTCATGATGG TCGCCTTCGC CACCCTCGCC GCCGCCACCT CCTGGCCGAT GCTGCTCGTC
GCCGCCTGCC TGCTGGGACT GGGCAACGGC GCCATGGACG TCTCCATGAA CGCCCTCGCG
GTGAACGCCG AGCGCGTGGC TCGCCGCCGC ATCATGAGCA CCCTCCACGC CTTCTTCTCG
ATGGGGTCAC TCGCCGGCGC CAGCGCCGTC CTGGGTGCCA ACACCGTCAG CTCCGGCCCC
GGGGGGACGG TCGTGGTGGC GACCCTCGGC GCCATCGTGG TGGTCTCCGC GCTGCTGCTG
ACCATCAGCC CCCGCACCCC GGACACCCCG ATCATCGCCC ACCGCGACGA GGCCGGCGGC
CGCACGCGCC TGCCCGCGAT CACGTGGCTT CTGGCCGCGA TGGCGGTGCT GTTCGGCCTC
ACCGAGGGCA CCGGGTGGGA CTGGTCGACC ATCCACGTCA CCGACGTCAC CGGCGTCTCC
CCCGGTGTGG GTGCCGCCGG CCTGGCGGTC TTCTCGGCCG CGATGGTGGC GCTGCGGCTC
AGCGGCGACT GGGTGGTGGA CCGCATCGGC GCCCGCCCCG CCCTCGTGGG GGGTGCGCTG
CTGGCCGCGG TCGGCTACCT CGTGGCGGCC ACCCAGAACT CCCTGCCCGT CGTGCTGGGC
GCGTGGGCGC TGGTGGGCAT CGGCGTGGCC GTCCTGGCCC CGATGATCTA CGGCATGGCC
GGACACCTGG GCGGCGGACG CATGCTCGCG GTGGTGGCCG GAGCGGGGTA CCTGACCTTC
CTGGCCGGTC CCGCACTGAT CGGCTGGGCG AGCACCCGCT GGGGCATGGG CCCGGCCATG
TTCGTGCCGC TGACCACCGC AGCCTTGGTG GCCGGGCTGG CGGCCATGTT GCCGCGTCGG
GCGCGGGAGG CCGCGGTGGC CGACGCCGGA GCCGGCGACT GA
 
Protein sequence
MLRPVLTSAP QVAALFVING FMIGIWGGLL ASLRDRIGIH EGDVSILLVT VGFSAAVTMQ 
ISGRLADRIG ARRPTIVGAV VMMVAFATLA AATSWPMLLV AACLLGLGNG AMDVSMNALA
VNAERVARRR IMSTLHAFFS MGSLAGASAV LGANTVSSGP GGTVVVATLG AIVVVSALLL
TISPRTPDTP IIAHRDEAGG RTRLPAITWL LAAMAVLFGL TEGTGWDWST IHVTDVTGVS
PGVGAAGLAV FSAAMVALRL SGDWVVDRIG ARPALVGGAL LAAVGYLVAA TQNSLPVVLG
AWALVGIGVA VLAPMIYGMA GHLGGGRMLA VVAGAGYLTF LAGPALIGWA STRWGMGPAM
FVPLTTAALV AGLAAMLPRR AREAAVADAG AGD