Gene Ksed_04210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_04210 
Symbol 
ID8371931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp410716 
End bp411891 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content73% 
IMG OID644990717 
Productformate dehydrogenase beta subunit 
Protein accessionYP_003148261 
Protein GI256824301 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.344233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.126289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC TGCGCGACCA GTTCTCCGGG CCCACCGACC CGGCGGCCGA CGCCGGGTGG 
GAGCCGCAAC CGCGCAAGGG CTTCTTCACC GACACGTCGA TCTGCATCGG GTGCAAGGCG
TGCGAGGTGG CGTGCAAGGA GTGGAACGCG CTGCCGCTGG ACTCCATGGA GTTCACGGGC
AACTCCTACG ACAACACCAA CTCGCTGGGG GCCAGCACGT GGCGCCACGT CGCCTTCATC
GAGCAGGGGG CCGATGAGGT GGCGGCCGCT CGTGAGTCCG GCCGCCGGTT GGTGGACCTC
GGCCTGCCGG GGGTGGGCAG TGGGCAGGAC GTGGGTGCGG GTCAGGCGCC GAGCGTGCCG
GCGGACGGTG CTGCCGGGTG CGGCGCGGGG GGCGGGTGCG GGTGCGCCTC GGGCGGCCAG
GCCGGCCAGG GCGGCCAGGG CGGACAGGGC GGAGTCACCC CGTCCGGGGG GACCGGCCCG
TCCGGGGAGT CGATGAACCC CATCACCGAC CTGCTGACGG CCCAGACCGA GGCGGAGAAG
GCGCGGGCGA TGGGGACGGT CCCTGACTTC CGGTGGCTGA TGTCCTCGGA CGTCTGCAAG
CACTGCACCC ACGCGGGCTG CCTGGACGTG TGCCCCACCG GCGCGCTCTT CCGCAGCGAG
TTCGGCACGG TGGTGGTGCA GGCCGACATC TGCAACGGCT GCGGCTATTG CGTGGGAGCC
TGCCCGTTCG GCGTGATCGA GCGGCGGACC GACGCCACCG GCGACCGCGG GCACGTGGAC
GGTGGCGAGG TGCCCCGCAT CGGCGTGGCC CAGAAGTGCA CCCTCTGCTA CGACCGCTTG
AGCCACGACC AGACGCCGGC CTGTGCGCAG ACCTGCCCGA CCACGTCGAT CCAGTTCGGT
GACCACGACG AGATGGTCCG CCGCGCGCAT GAGCGGGTGG ACCTGTTGCG CGGCAACGGA
TTCCCGGAGG CGCGCCTGTA CGGGGCCAAC GAGTTCGACG GGGTGGGCGG CACCGGGTCG
GTCTTCCTGC TGCTCGACGA GCCGGAGGTG TACGGCCTGC CGCCGGACCC CATCGTGCCC
ACGGCCGAGC TGCCGGCCAT GTTTCGCAGC GCGGTGACCG CCGCGGTCGG CCTGGTCGGG
GTGGCCGCCC TGTCCTTCCT GGGGGGTCGC CGATGA
 
Protein sequence
MTSLRDQFSG PTDPAADAGW EPQPRKGFFT DTSICIGCKA CEVACKEWNA LPLDSMEFTG 
NSYDNTNSLG ASTWRHVAFI EQGADEVAAA RESGRRLVDL GLPGVGSGQD VGAGQAPSVP
ADGAAGCGAG GGCGCASGGQ AGQGGQGGQG GVTPSGGTGP SGESMNPITD LLTAQTEAEK
ARAMGTVPDF RWLMSSDVCK HCTHAGCLDV CPTGALFRSE FGTVVVQADI CNGCGYCVGA
CPFGVIERRT DATGDRGHVD GGEVPRIGVA QKCTLCYDRL SHDQTPACAQ TCPTTSIQFG
DHDEMVRRAH ERVDLLRGNG FPEARLYGAN EFDGVGGTGS VFLLLDEPEV YGLPPDPIVP
TAELPAMFRS AVTAAVGLVG VAALSFLGGR R