Gene Ksed_04160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_04160 
Symbol 
ID8371926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp403121 
End bp403870 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content77% 
IMG OID644990712 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003148256 
Protein GI256824296 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0647577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCACC CCACCCTGCT CGTGCTCCGC GCCCTGGCCC GCCACCGCGG GCCGGTCGCC 
GCGGGGCACC TGGCGCGGGA GACCGGCATC CCGCGGGCGT CCCTCTACCG GGCACTGGCC
GACCTGCGCG AGACCGGCTT CGTCACCCAC CTGCCCGAGG AGCAGCAGTG GATGCTGGGG
CTGGCCGCCT TCGAGCTGGG CTTCGCCTAC TCACGGCAGG AGTCGTTGCA GCGCCTCGGT
CGACCCGTGG TGCGGCGGCT CGTGGACGAG GTGCAGCAGA ACGCCCACCT GGCCGTGCTG
CACGGCACCG ACGTGCTGTA CCTCGCCGAG GAGCGGGCCC CCCGGCGCCC GTCCCTGGTG
ACCGACGTGG GCGTGCGCAT CCCCGCCCCG TGGACCGCCA GCGGCCTGGC CGTGCTGGCT
GCCCTCCCCC GCGAGCAGGT GCGCGCCCTC TTCCCCGATG CGGGGAGCTT CGTCGCCTCC
CGCGGCGACC ACCCGCACCG GGCGCCCGAC ACCCCACAGG CCCTGCGGCG GGCGCTGGTG
GCGGTTCGGG CCGACGGGAT CGCCCGGGAG CGGGACACCG TGACGGCGGG CCTGGCCTCG
GTGTCCGTCG CGGTGGCCGA CGCCTCCGGC CACCCGGTGG CTGCCGTCGC GGTGACCTTC
GAGCACGCCC GGACCGAGCC GGCGGAGGTC ACCGCCCTGG AGGCCGCCGT GCGTGCAGCG
GCCGAGGACG TGGAGCGCCG CCTGCGCTGA
 
Protein sequence
MPHPTLLVLR ALARHRGPVA AGHLARETGI PRASLYRALA DLRETGFVTH LPEEQQWMLG 
LAAFELGFAY SRQESLQRLG RPVVRRLVDE VQQNAHLAVL HGTDVLYLAE ERAPRRPSLV
TDVGVRIPAP WTASGLAVLA ALPREQVRAL FPDAGSFVAS RGDHPHRAPD TPQALRRALV
AVRADGIARE RDTVTAGLAS VSVAVADASG HPVAAVAVTF EHARTEPAEV TALEAAVRAA
AEDVERRLR