Gene Ksed_03970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03970 
Symbol 
ID8371907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp383097 
End bp383783 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content77% 
IMG OID644990693 
ProductABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
Protein accessionYP_003148237 
Protein GI256824277 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.153637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGC CGATGGTGCG CCTGGACGGT GTGACCGCTG CCCCCGAACG TGGCGCACCC 
CCCGTGCTGC GCGACCTGTC CCTGGCCCTG GAGGCGGGGA CGACCACGGC GGTGACCGGG
CCCAACGGCG CCGGCAAGTC CACCCTGTGC CGGGTGGTCG CCGGCCTGGT GGCGCCGGCC
CGGGGAACCG TCGAGGTGGC CGGTCGCCCG GTCGTGCCCG GTCACCCGGC GCACGGCGTG
GCCATGCTGT TCCAGTCGCC GCGCCGCTCG GTGAGCCCGC GCATGACCCT GCGGCAGGCC
ATCGCGGAGC CGTTGGAGCT CCGTCGCCGG CCGGCGGCCC GCACCCGGCG AACGGTGGAC
GCGATGGCCG ATGCGGTGGG CCTCACCCCG GACCTGCTGC GCCGGCGCCC GGCGGCGGTC
TCCGACGGCC AGCTGCAGCG CGCTGCCCTG GGGCGCGCCC TCATCGGCGA GCCGCAGGTG
CTGCTGGCCG ACGAGGTGAC GGCCATGCTC GACCCGGCGA CCACCGCCTC GGTGGTCGCG
CTGCTGCGGG AGCGCGTGGA GGAGGGGCTG ACCGTGCTGA CCATCAGCCA CGATGCGGAG
CTGCTCGCGC GCTGGTGCGA CCGGCCGAGT GACCGGGTGC TGGCGCTCGC GGACCTGACC
GGCGACGCCG GGGACGGGGC GGCGTGA
 
Protein sequence
MMQPMVRLDG VTAAPERGAP PVLRDLSLAL EAGTTTAVTG PNGAGKSTLC RVVAGLVAPA 
RGTVEVAGRP VVPGHPAHGV AMLFQSPRRS VSPRMTLRQA IAEPLELRRR PAARTRRTVD
AMADAVGLTP DLLRRRPAAV SDGQLQRAAL GRALIGEPQV LLADEVTAML DPATTASVVA
LLRERVEEGL TVLTISHDAE LLARWCDRPS DRVLALADLT GDAGDGAA