Gene Ksed_03820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03820 
Symbol 
ID8371892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp368768 
End bp369769 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content75% 
IMG OID644990678 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003148223 
Protein GI256824263 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.048726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGGC CGACGCGCCT GCAGGACCTT GCCGCGCGCG CCGGTGTCTC CCAGGCGACC 
GTCAGCCGGG TGCTCAACGG GCACAGCGTC CGCCCCGCCT CCTCCGATGC GGTGGTGCGC
GCCCTGGACG CGCTGGGCCT GGACCGCCCG GCGCACCTGC AGCCGCGGCG CGGCGGCCTG
GTGGGGCTGA TCACCCCGGA GCTGTCCAAC CCGATCTTCC CCGCGCTGGC CCAGGCCATC
GAGACCCGGC TGGCGCCCAG CGGGTACACG GCGGTGCTGT GCACCCAGGC CGTCGGGGGC
GTGAGCGAGG AGGACTACGT CGAGCTGCTG CTCCAGCGCG ACGTCGCGGC GCTGGTGGTG
GCCTCCGGGA CGCACGCCGA CACGCGCAAC AGCACCGAGC GCTACCAGCG CCTCATCGAC
CGCGGGCTGC CGCTGGTGCT CATCAACGGC ACGCGCGATG AGGTGGCCGA CCACTGCCTG
GCCTGCGACG ACGCCCTCGG CGTGGAGATG GCCCTGGAGC ACCTGGTGAG CCTGGGGCAC
CGCCGGATCG GCCTGGCGGT GGGGCCGCGC CACTTCGTGC CGGTGCGCCG CAAGGTCCGC
GCACTGCGTG CCGTCGGGGA GCGGCTGGGG GTGCAGGTGG ACGTGGAGCA CACCTTCTAC
ACCGTCGAGG GCGGCGCGGC GGCCGGCACG GCCCTGCTGG ACCGGGGCGC CACCGCGGTC
GTGGCGGCCA GCGACCTGAT GGCTCTGGGG GCCATCCGCG AGGCCGTGGC CCGCGGGGTC
CAGGTCCCGG GGGAGCTGTC GGTGGTCGGG TTCGACGACT CCATCCTGAT GCAGTTCACG
AACCCCCCGC TGACCACCGT GCGCCAGCCG GTGGAGGCCC TCGCGCGGGC CACGGTCGAC
CGGCTGCAGT GGCAGCTCCA GGGGCAGGAG CCCCCGCGCC ACGGCGAGGT GCTCTTCGCC
CCCGAGCTGG TGGTGCGCGG GACCACGGCC GCCGTCGGCT GA
 
Protein sequence
MLRPTRLQDL AARAGVSQAT VSRVLNGHSV RPASSDAVVR ALDALGLDRP AHLQPRRGGL 
VGLITPELSN PIFPALAQAI ETRLAPSGYT AVLCTQAVGG VSEEDYVELL LQRDVAALVV
ASGTHADTRN STERYQRLID RGLPLVLING TRDEVADHCL ACDDALGVEM ALEHLVSLGH
RRIGLAVGPR HFVPVRRKVR ALRAVGERLG VQVDVEHTFY TVEGGAAAGT ALLDRGATAV
VAASDLMALG AIREAVARGV QVPGELSVVG FDDSILMQFT NPPLTTVRQP VEALARATVD
RLQWQLQGQE PPRHGEVLFA PELVVRGTTA AVG