Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_03820 |
Symbol | |
ID | 8371892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 368768 |
End bp | 369769 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644990678 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003148223 |
Protein GI | 256824263 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.048726 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGGC CGACGCGCCT GCAGGACCTT GCCGCGCGCG CCGGTGTCTC CCAGGCGACC GTCAGCCGGG TGCTCAACGG GCACAGCGTC CGCCCCGCCT CCTCCGATGC GGTGGTGCGC GCCCTGGACG CGCTGGGCCT GGACCGCCCG GCGCACCTGC AGCCGCGGCG CGGCGGCCTG GTGGGGCTGA TCACCCCGGA GCTGTCCAAC CCGATCTTCC CCGCGCTGGC CCAGGCCATC GAGACCCGGC TGGCGCCCAG CGGGTACACG GCGGTGCTGT GCACCCAGGC CGTCGGGGGC GTGAGCGAGG AGGACTACGT CGAGCTGCTG CTCCAGCGCG ACGTCGCGGC GCTGGTGGTG GCCTCCGGGA CGCACGCCGA CACGCGCAAC AGCACCGAGC GCTACCAGCG CCTCATCGAC CGCGGGCTGC CGCTGGTGCT CATCAACGGC ACGCGCGATG AGGTGGCCGA CCACTGCCTG GCCTGCGACG ACGCCCTCGG CGTGGAGATG GCCCTGGAGC ACCTGGTGAG CCTGGGGCAC CGCCGGATCG GCCTGGCGGT GGGGCCGCGC CACTTCGTGC CGGTGCGCCG CAAGGTCCGC GCACTGCGTG CCGTCGGGGA GCGGCTGGGG GTGCAGGTGG ACGTGGAGCA CACCTTCTAC ACCGTCGAGG GCGGCGCGGC GGCCGGCACG GCCCTGCTGG ACCGGGGCGC CACCGCGGTC GTGGCGGCCA GCGACCTGAT GGCTCTGGGG GCCATCCGCG AGGCCGTGGC CCGCGGGGTC CAGGTCCCGG GGGAGCTGTC GGTGGTCGGG TTCGACGACT CCATCCTGAT GCAGTTCACG AACCCCCCGC TGACCACCGT GCGCCAGCCG GTGGAGGCCC TCGCGCGGGC CACGGTCGAC CGGCTGCAGT GGCAGCTCCA GGGGCAGGAG CCCCCGCGCC ACGGCGAGGT GCTCTTCGCC CCCGAGCTGG TGGTGCGCGG GACCACGGCC GCCGTCGGCT GA
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Protein sequence | MLRPTRLQDL AARAGVSQAT VSRVLNGHSV RPASSDAVVR ALDALGLDRP AHLQPRRGGL VGLITPELSN PIFPALAQAI ETRLAPSGYT AVLCTQAVGG VSEEDYVELL LQRDVAALVV ASGTHADTRN STERYQRLID RGLPLVLING TRDEVADHCL ACDDALGVEM ALEHLVSLGH RRIGLAVGPR HFVPVRRKVR ALRAVGERLG VQVDVEHTFY TVEGGAAAGT ALLDRGATAV VAASDLMALG AIREAVARGV QVPGELSVVG FDDSILMQFT NPPLTTVRQP VEALARATVD RLQWQLQGQE PPRHGEVLFA PELVVRGTTA AVG
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