Gene Ksed_03240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03240 
Symbol 
ID8371834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp311589 
End bp312278 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content70% 
IMG OID644990620 
Productresponse regulator with CheY-like receiver domain and winged-helix DNA-binding domain 
Protein accessionYP_003148166 
Protein GI256824206 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.604152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCAGA CCCAGACCGC CGTGCACGTC CTCCTCGTCG AGGACGACGA GATGCTGCGT 
GAGACGACCG CGCTGGTGCT GGAGCGGCAG GGCTTCACCG TCTCCACCGC CTCCGACGGG
GTGGAGGGCC TCGACGCCCT GCGGCGCGAG ACCTTCGACG TCGCCGTGGT GGACGTGATG
ATGCCCCGCA TGGACGGCAT CACCTTCGCG CGAAAGGTGC GCGAGGGCTC CGACCTGCCG
ATCGTGCTGC TCACGGCCCG CGACCTGCCC CACGACCAGC TCGCGGGCTT CCAGGTGGGA
GTGGACGACT ACGTCACCAA GCCCTTCGAC GGGGAGGTGC TCGCCGCGCG TCTGCGAGCG
GTGCTCCGTC GCGTCGACAC GGTGCCCGAG GAGCCGGCGA CCGCCACGAT CCGGGTCGCG
GACCTCAGCG TGAACCGTGA CGGGATGGTG GTGAAGCGAG CCGGCGAGAC CATCAGCCTC
AGCGCCACGG AGTTCCGGCT GCTCGAGGTG CTGCTGGACC ACCGGGGGCG GGTGCTGTCG
CGCCACCAGC TGCTGGAGAT GGTCTGGGAC ATCGGGTCGT GGGGCGACAC GCACGTGGTC
GAGGTGACCG TCCAGCGCCT GCGCCGCAAG ATCGGGGCCG AGCGGATCGT CACGGTCCGG
GGAGCCGGGT ACAAACTGGT GGATGCGTGA
 
Protein sequence
MNQTQTAVHV LLVEDDEMLR ETTALVLERQ GFTVSTASDG VEGLDALRRE TFDVAVVDVM 
MPRMDGITFA RKVREGSDLP IVLLTARDLP HDQLAGFQVG VDDYVTKPFD GEVLAARLRA
VLRRVDTVPE EPATATIRVA DLSVNRDGMV VKRAGETISL SATEFRLLEV LLDHRGRVLS
RHQLLEMVWD IGSWGDTHVV EVTVQRLRRK IGAERIVTVR GAGYKLVDA