Gene Ksed_03020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03020 
Symbol 
ID8371812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp291342 
End bp292571 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content72% 
IMG OID644990598 
Productalpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase 
Protein accessionYP_003148144 
Protein GI256824184 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACGCC AACTTCCCAA CCCTCGTGAA CTCGCGCCGC TGATGCGGTT CAGCAAGCCC 
ACCCTGAACC GCACCACCGC GCGGCTCGCC AAGGCGGCCG ACATCGCCGA CGTCCGACGC
ATCGCCCGCC GGGTCACGCC CACCGGACCG TTCGACTACG TCGACGGCGC AGCCAACTCC
GAGGAGTCCA TGCGCCGCAA CACCGAGGCG TACCGCAACC TCGAGCTGCG CCCCACCGTT
CTGCGCGACG TGGGCGAGGT GGACCTCTCC ACCGAGGTCT TCGGCCAGCG CAGCGAGCTG
CCCGTGGGCC TGGCCCCCAC CGGATTCACC CGCATGATGC ACGCCGCGGG TGAGCCCGCC
GTGGCCCGCG CCGCACAGTC CGCCGGGGTG CCTTACACCC TGTCCACCAT GGGGACCACG
GCCATCGAGG ACCTGGCGGC CCAGGTGCCA GACGCCCGCC GCTGGTTCCA GCTCTACTCG
TGGCGCGAGG ACCGCGATCG CGCTCGCGGC CTGGTGGAGC GGGCCCAAGA GAACGGGTAC
GACACGCTGA TGGTCACCGT GGACACCGCC ACCGGCGGCC TGCGCTATCG CGACCACCGC
AACGGCATGA CCATCCCGCC GCAGCTCACG GCCCGCACGC TGGTGGACGC CTCCTACCGG
CCGCGCTGGT GGTTCGACTT CCTCACCACC GAGCCGCTGC GCTTCGCGAC CCTCTCGAGC
TCCGCCGGGG ACTCGATGGA CGTGATCATG AAGACCTTTG ATCCCACCCT GTCGTGGGCG
GACATCGAGT GGATCCGCGA GGTGTGGGCC GGTCCGCTGC TGGTCAAGGG CATCCAGACC
CCCTCGGACG CCCAGCGGGC CCTCGATGCG GGGTGCGACG GCGTGTACCT GTCGAACCAC
GGTGGGCGGC AGCTCGACCG GGCACCCGTG CCACTGGCCG AGCTGCCCGG CATCCGCGAG
GTGCTGGGGC CGGACGTGCC GATCATCGTG GACTCCGGCA TCACCAGCGG CGTCGATGTG
CTGGGAGCCC TGGCCTTGGG CGCCGACTTC ACGATGATCG GCCGCGCCTA CCTGTACGGG
CTCATGGCCG GCGGGCAGCG GGGCGTGGAG CGGGTGCTCG ACATCCTGCG GGCCGAGCTG
CAGGTGGGCA TGCAGCTGCT GGGCGTGCGC TCTGTGGACG AGCTGGGCCC GCAGCACGTG
CGGCTGGACC ACCGCGCCCC GCGGGACTGA
 
Protein sequence
MRRQLPNPRE LAPLMRFSKP TLNRTTARLA KAADIADVRR IARRVTPTGP FDYVDGAANS 
EESMRRNTEA YRNLELRPTV LRDVGEVDLS TEVFGQRSEL PVGLAPTGFT RMMHAAGEPA
VARAAQSAGV PYTLSTMGTT AIEDLAAQVP DARRWFQLYS WREDRDRARG LVERAQENGY
DTLMVTVDTA TGGLRYRDHR NGMTIPPQLT ARTLVDASYR PRWWFDFLTT EPLRFATLSS
SAGDSMDVIM KTFDPTLSWA DIEWIREVWA GPLLVKGIQT PSDAQRALDA GCDGVYLSNH
GGRQLDRAPV PLAELPGIRE VLGPDVPIIV DSGITSGVDV LGALALGADF TMIGRAYLYG
LMAGGQRGVE RVLDILRAEL QVGMQLLGVR SVDELGPQHV RLDHRAPRD