Gene Ksed_01800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01800 
Symbol 
ID8371692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp177797 
End bp179053 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content69% 
IMG OID644990487 
Producttransposase 
Protein accessionYP_003148033 
Protein GI256824073 
COG category[L] Replication, recombination and repair 
COG ID[COG3328] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTC CTCACATTGT CGACCCTTCC GGCCTGCTTG GTGAAGCCTT GGCCGAGGCG 
TCCCCGGATC TGATGCGCAG CCTGCTGCAG GACGTGATCA ATGCCTTGCT CTCCGCGGAC
GCGGACGCTG TTGCCGGCGC GGAGTACGGC CGGCCCAGCG CTGGCCGTTC TGCGCAGCGC
AACGGCTACC GCCACCGCGA CCTCGACACC CGCGTCGGCA CGATCGACGT CGCCGTCCCC
AAGCTCCGCT CCGGCACCTA CTTCCCCGAG TGGCTGCTCG AGCGCCGCAA GCGCGCCGAG
TCCGCCCTGG TCACGGTCGT CGCCGACTGC TACCTCGCCG GTGTCTCCAC CCGCCGGATG
GATAAGCTCG TGAAGACCCT CGGCATCAAC AGCCTGTCGA AGTCGCAGGT CAGCAGGATG
GCGGAGTCGC TGGACGAGCA CGTCGAACAG TTCCGCCACC GCCCCCTGGA CGAGGCCGGC
CCCTTCACGT TCGTCTCCGC AGATGCCCTG ACGATGAAGG TCCGCGAGGG CGGCCGGGTC
ATCAACGCCG TCGTCCTGCT GGCCATCGGC GTGAACGGTG ACGGGCACCG CGAGGTGCTC
GGCATGCGGG TCGCGACCAG CGAGACGGGA GCAGCGTGGA ACAGCTTCTT CGCCGACCTC
GTCGCCCGCG GCCTCGCCGG GGTCCGCCTG GTCACCAGTG ACGCGCATGC GGGCCTGGTC
GAAGCGATCG CTGCGCACCT GCCCGGCGCG GCCTGGCAGC GGTGCCGCAC CCACTACGCA
GCGAACCTCA TGGCCGTGAC GCCCAAGAGC ATGTGGCCGG CGGTCAAGGC GATGCTGCAC
AGCGTCTATG ACCAGCCCGA TGCAGCAGCG GTGAACGCGC AGTTCGACCG GCTGCTGGAC
TACGTCAGTG AGAAGCTCCC GGCCGTGGCC GAGCACCTCG ACGCCGCCCG CGCGGACCTC
CTCGCGTTCA CCGCGTTCCC CAAGGACGTG TGGGTGCAGA TCTGGTCGAA CAATCCCACC
GAGCGTTTGA ACAAGGAGAT CCGCCGCCGC ACCGACTCCG TGGGCATCTT CCCCACCCGC
GAGGCGATCG TCCGTCTCGT CGGCGCGGTC CTGGCCGAGC AGACCGACGA GTGGGCCGAA
GGACGACGGT ATCTCGGCCT CGACGTCCTC GCCCGGTGCC GCCTCAACCT CGTCCCCGAC
ACCAACACCA ACACCGAGGA GGTCACCACC AGTTCCCTGC CCGCCCTGAC CGCCTGA
 
Protein sequence
MTAPHIVDPS GLLGEALAEA SPDLMRSLLQ DVINALLSAD ADAVAGAEYG RPSAGRSAQR 
NGYRHRDLDT RVGTIDVAVP KLRSGTYFPE WLLERRKRAE SALVTVVADC YLAGVSTRRM
DKLVKTLGIN SLSKSQVSRM AESLDEHVEQ FRHRPLDEAG PFTFVSADAL TMKVREGGRV
INAVVLLAIG VNGDGHREVL GMRVATSETG AAWNSFFADL VARGLAGVRL VTSDAHAGLV
EAIAAHLPGA AWQRCRTHYA ANLMAVTPKS MWPAVKAMLH SVYDQPDAAA VNAQFDRLLD
YVSEKLPAVA EHLDAARADL LAFTAFPKDV WVQIWSNNPT ERLNKEIRRR TDSVGIFPTR
EAIVRLVGAV LAEQTDEWAE GRRYLGLDVL ARCRLNLVPD TNTNTEEVTT SSLPALTA