Gene Ksed_01780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01780 
Symbol 
ID8371690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp176877 
End bp177353 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content70% 
IMG OID644990485 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003148031 
Protein GI256824071 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR01950] redox-sensitive transcriptional activator SoxR 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.95899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCACTC CCCATGACGA GCTGACGATG TCTGAGGTGG TCCGGCGTTC AGGTGTGAGC 
GCGTCGGCGC TGCGCTTCTA CGAGGCACGC GGGCTCATCA AGGCCGAGCG GACCGCCACG
AACCGTCGGA TCTACCAGCG ACACGTGCTG CGTCGCCTGG CGGTCATCCG GAGCGCACAG
GCCATCGGCC TGTCGCTGTC GGAGATCCGC GCCGGGTTCG CCTCGGTGCC CACGGACCGG
GCCCTGACTC GCGAGGAGTG GCAGGACCTC TCGGCGATGT GGCGCGAGAC GCTCGAGGAG
CGGATCGCCG CCCTCGGTGA GCTGCGCGAC CGTCTGGACG GGTGCATCGC GTGTGGCTGC
CTCTCGCTGG ACACGTGCCC GCTGCGCAAC CCGGAGGACG AACGCCGCGC AGAGGGACCG
GGCCCGCGCG CGATGCCGGC GGTTCTGGCC CTCATGAACG GCACATCCGC AGACTGA
 
Protein sequence
MITPHDELTM SEVVRRSGVS ASALRFYEAR GLIKAERTAT NRRIYQRHVL RRLAVIRSAQ 
AIGLSLSEIR AGFASVPTDR ALTREEWQDL SAMWRETLEE RIAALGELRD RLDGCIACGC
LSLDTCPLRN PEDERRAEGP GPRAMPAVLA LMNGTSAD