Gene Ksed_01570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01570 
Symbol 
ID8371669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp156605 
End bp157960 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content75% 
IMG OID644990464 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_003148010 
Protein GI256824050 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.785558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGTC AGCCCACGAG CTCGGCGGCC CACCCCGGGC CGGCTGGCCA GCCCCCCTCG 
CCCGCCGACC TGACTCACCC GGTCGCCGAC CCGGCTCACC TCACCCCGGA GCTCGCCGCT
GCCCTGGAGG CCCTGCAGGC CGGCCGCCCG GTGTTGGTGC TCGACGACGA GGACCGCGAG
AACGAGGGCG ACGTGATCCT GGCCGCGCAG ACCCTGACCC CGGAGTGGCT GGCCTGGACC
ATCCGCCACA CCTCCGGCTA TGTGTGCGCA CCCCTGACCG CCGAGCGGGC GGATGCCCTC
GCGCTGCCGC TCATGGTGCG GGACAACGCA GACCCCTTCC GGACCGCGTA CACGGTCACC
GTCGACGCCG CGGCCGGCGT GACCACGGGC ATCAGCGCCG CCGACCGCGC CCACACGTTG
CGCACCCTGG CCGATGCGGA CAGCGTCGCC ACCGACCTCA TCCGCCCCGG TCACATCGTG
CCCCTGCGCG CCCGCGCCGG TGGGGTCCTC GAGCGCGCCG GGCACACCGA GGCCGCCGTG
GACCTGTGTC GGCTGGCTGG GCTCGAGCCC GTGGGCGCCA TCGCCGAGCT GGTGCATGGC
GACGGCTCGA TGATGCGCGC GCCGGCCGTG CGCGAGCTCG CCGCCGAGCA CGGCCTGCCC
GTCCTCACCA TCGAGGCCCT GGCCCGGTGG CGCTCGGTCC ACGACCGGCT CGATGCGGTG
GCCGTCGCCC AGCTGCCGAC CGCCCACGGA CCGTTCGTCG TGCACGCCGT GGCCGATCGC
GTCACGGGCG TGGAGCACCT CGCGCTCGTG GCACCCGGCG CCTCGGGTGG CCCCGCCGTG
CCCGGTGCCC CGGGTGACCC AGCCGCTCCC GGCGCCCCGG CCCCGGTCCC CGTCCGACTG
CACAGCGAGT GCCTCACCGG TGACGCCCTG GGCTCCCAGC GTTGCGACTG TGGTGCCCAG
CTCGACGCGG CGCTGGCCGA TGCCCAGGCG CGCTCCGGCA TCGTCCTCTA CCTGCGCGGC
CACGAGGGGC GGGGCGTCGG GCTGGCGGCG AAGATCGCGG CCTACGCCCG GCAGGACGCC
GGTGCAGACA CCGTCGACGC CCAGCACGAG CTCGGCCTGC CCGTCGACTC CCGCGACTTC
GCCGTGGCCG CCGCCATGTT GGCGCACCTG GGGGTCGACC GCATCGAGCT GACGACGAAC
AACCCCGCCA AGGTCTCGGC CCTGCAGTCC CTCGGGGTGG AGGTGGCCGC GACGCGTCCC
AGCATCGTGG GAGTCACCCC CCACAATCTC GGCTACCTGC GCACCAAGCG GGACCGGATG
GGGCACACCC TGCCCGGGGA CCTGGGTGTG ACGTGA
 
Protein sequence
MTGQPTSSAA HPGPAGQPPS PADLTHPVAD PAHLTPELAA ALEALQAGRP VLVLDDEDRE 
NEGDVILAAQ TLTPEWLAWT IRHTSGYVCA PLTAERADAL ALPLMVRDNA DPFRTAYTVT
VDAAAGVTTG ISAADRAHTL RTLADADSVA TDLIRPGHIV PLRARAGGVL ERAGHTEAAV
DLCRLAGLEP VGAIAELVHG DGSMMRAPAV RELAAEHGLP VLTIEALARW RSVHDRLDAV
AVAQLPTAHG PFVVHAVADR VTGVEHLALV APGASGGPAV PGAPGDPAAP GAPAPVPVRL
HSECLTGDAL GSQRCDCGAQ LDAALADAQA RSGIVLYLRG HEGRGVGLAA KIAAYARQDA
GADTVDAQHE LGLPVDSRDF AVAAAMLAHL GVDRIELTTN NPAKVSALQS LGVEVAATRP
SIVGVTPHNL GYLRTKRDRM GHTLPGDLGV T