Gene Ksed_01520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01520 
Symbol 
ID8371665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp152641 
End bp153720 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content74% 
IMG OID644990460 
Productenoyl-CoA hydratase/carnithine racemase 
Protein accessionYP_003148006 
Protein GI256824046 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.801098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCG ACCTCACCCC CACCCCCGAG ACCGATGACG TGCTGGTCGG GGTGCGTGAC 
GGCATCGCCC GCATCCACCT GAACCGCCCG AAGGCGCTCA ACGCCCTGAC GCACGACATG
TGCGCTGCCA TGCTGGGTCA GCTGCGCGAG TGGGACGCCG CCGAGGGTGA GCAGCGCCCG
CGGGCCGTGG TGGTCTCCGG CGAGGGGGAG AAGGGCTTGT GCGCCGGCGG CGACATCAAG
GTGCTGCGCG AGGCCGCGAC CTCCGGCGAG GTGGGCCCCG CCCGCGACTT CTGGCGCACC
GAGTACGAGC TCAATCAGCT GATCGCCGAC TACCCGATCC CCTACGTGCC GCTCATGCAC
GGCGCGGTGA TGGGGGGCGG CATCGGCATC AGCGCCCACG GATCGCACCG GTTGGTGGCC
GCGGACGCGA AGGTGGCCAT GCCCGAGACC GGGATCGGCC TGTTCCCCGA CGTGGGTGCG
CTGTACCTGT TGGCCCGCGC CCCCTTCGAG CTGGGCACGC ACGTGGCCCT GACCGGCGAC
CGTTTCTCCG GGGCCGATGC GGTGGTGCTC GGCCTGGCCG ATGCGGTGGC CCCCGCCGAG
TTCCTGGACC CCGAGGCCGT GGTGGACCGG TTGGCCGGCG GTGAGTCCGC GGACGACCTG
GTGGCTGCCG CGCGGGAGGC CGGCGGTGAG CCGGAGGCCC CGCTGCTGAG CCAGGCCGCA
TGGACCGCCG AGTGCTACGA GGGCGAGGCC GCCGGCGCCA TCCTGGAGCG CCTGCGCGGC
CACGACGCCG AGGGTGCCCA GAAGGCCGCC GAGCTGCTGG AGTCGCGCTC ACCGCTCTCG
GTGAACGTGA CGCTCGCCGG GCTGCGCGCT GCCGCGGGGG ACACCCTCGC GGGGGTGCTG
GAGCAGGACC TGGAGCGGGC CACCGGCATG ATCCTCAGCG GGGACTTCGC CGAGGGCGTG
CGCGCCGTGC TCATCGACCG GACCAACGAC GCCGCCTGGC GCCACCCCAG CATCGCCGAG
GTGCCGGCAG ACGACGTGAA GGCCGTGCTG GCCGGCGAGC GCCTCGACCA GGAGGACTGA
 
Protein sequence
MATDLTPTPE TDDVLVGVRD GIARIHLNRP KALNALTHDM CAAMLGQLRE WDAAEGEQRP 
RAVVVSGEGE KGLCAGGDIK VLREAATSGE VGPARDFWRT EYELNQLIAD YPIPYVPLMH
GAVMGGGIGI SAHGSHRLVA ADAKVAMPET GIGLFPDVGA LYLLARAPFE LGTHVALTGD
RFSGADAVVL GLADAVAPAE FLDPEAVVDR LAGGESADDL VAAAREAGGE PEAPLLSQAA
WTAECYEGEA AGAILERLRG HDAEGAQKAA ELLESRSPLS VNVTLAGLRA AAGDTLAGVL
EQDLERATGM ILSGDFAEGV RAVLIDRTND AAWRHPSIAE VPADDVKAVL AGERLDQED