| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_01040 |
|---|
| Symbol | |
|---|
| ID | 8371617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 106586 |
|---|
| End bp | 107983 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644990415 |
|---|
| Product | predicted nucleoside-diphosphate sugar epimerase |
|---|
| Protein accession | YP_003147961 |
|---|
| Protein GI | 256824001 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCT CCGGGACCCC CACGGGGACC ACCCCAGGAC AGGCCCTTGT CACGGGCGCC
ACCGGCTACA TCGGCTCGCG CTTGGTCCCG GCGCTGCTGG AGGCAGGGTG GACGGTGCGG
GTCCTGGCGC GCTCACCGGA GAAGCTCGAG GGCCGTTCCT GGGCCGTTGA CGTAGACGTC
CACGCCGGGG ACGCGAACTC CCTCGACGAC CTCGCCAGCG CCCTGGAGGG GGTGGAGGTC
GCCTACTACC TGCTGCACTC GATGGACGGC GAGGGCGACT TCGTGGAGCG CGAGCGCGCC
ATGGCCCAGA CCTTCGCCGC CGCCTGCGAC GCCGCCGGGG TCGGCCGCAT CGTCTACCTG
GGCGGCATGC ATCCGCACAA CGAGCCGCTG TCCACCCACC TGTACAGCCG CAAGGCCGTC
GGTGACGTGT TCCTCGCGGC CGACACCCCT GCCGCCGTCC TGCAGGCCGC GGTGATCGTC
GGCGCCGGGT CAGCCAGCTT CGAGATGCTG CGCCACCTCA CCGACCGGCT CCCGGTGATG
CTCGCCCCGC GCTGGTTGGA CAACCGCATC CAGCCCATCG CCGTGGCCGA CGTGCTGCAC
TACCTGGTCG GGGCCGCCTC CTTGCCCGCC GGGGTGAACC GCGCCTTCGA CGTGGGCAGC
GACGAGGTGC TCCGCTTCCG CGACATGCTG GTGCGCTACG GCCAGGTGGC CGGCCTGCGA
CGCCGCCGCA TCGCCCTGGC GCCGGTGATG ACCCCCTGGC TCGCCAGCCA CTGGGTGGGC
TTGGTGACGC CGGTGCCCGC CGGCGTGGCC AAGCCGCTGG TCGGCTCGCT GGTGCACGAG
GTGGTGGTCA AGGACGGCCG CGCGCTGGAG GAGTTCACCG GCGCCCCGGC CGGCGGCCAC
ACCCCATTCG ACGACGCCGT GGCACGCGCC CTGGTCCGGG CCGATGCGGT GGACCCCGCA
GCCGAGGGCG AGGAGCCCGC CGACGCGCTG CCGGGCGACC CCGAGTGGGT GGGCCGCCAG
CAGCGAACCG AGACCTGGCG CAGCATCGTC GACGCGCCGG CGGACGACCT GTGGGCTGAG
GTGGAGTCCA TCGGCTCGAG CGGCTCGCTG GGCCCCCGGG GCGCGCTGGG CCCGTGGGCC
CTCGAGTCGA CGGATCGGGA GGGCACGACC CGCTCGGTAC GGCTCCGTTC CACCCGCGCC
CTGCCCGGGA CGGCGCGGCT GACCCTCGCG GTCACCCCCG CCCCCCACGA TGCGGGGCAG
TCCCTCCTGA CCCAGGAGGT CACCTTCGTG CCCCACGGGC TGGCTGGAGA GACCTCCTGG
TGGGGCTCCT ACCCCGCCCA CCGCGCCCTG TTCACGAGGG TGCACCAGGG CATCGTGGAG
CGCGCACGGG TCCGCTGA
|
|---|
| Protein sequence | MTTSGTPTGT TPGQALVTGA TGYIGSRLVP ALLEAGWTVR VLARSPEKLE GRSWAVDVDV
HAGDANSLDD LASALEGVEV AYYLLHSMDG EGDFVERERA MAQTFAAACD AAGVGRIVYL
GGMHPHNEPL STHLYSRKAV GDVFLAADTP AAVLQAAVIV GAGSASFEML RHLTDRLPVM
LAPRWLDNRI QPIAVADVLH YLVGAASLPA GVNRAFDVGS DEVLRFRDML VRYGQVAGLR
RRRIALAPVM TPWLASHWVG LVTPVPAGVA KPLVGSLVHE VVVKDGRALE EFTGAPAGGH
TPFDDAVARA LVRADAVDPA AEGEEPADAL PGDPEWVGRQ QRTETWRSIV DAPADDLWAE
VESIGSSGSL GPRGALGPWA LESTDREGTT RSVRLRSTRA LPGTARLTLA VTPAPHDAGQ
SLLTQEVTFV PHGLAGETSW WGSYPAHRAL FTRVHQGIVE RARVR
|
|---|
| |