Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_4530 |
Symbol | |
ID | 5600957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009806 |
Strand | - |
Start bp | 13224 |
End bp | 13949 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640930605 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001468113 |
Protein GI | 157283845 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00470183 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATCCGTG TCCTGGTCGT CGACGACCAC CGCCTGGTTC GTGCCGGCCT GATCGCTCTC CTGCACGCCG GCGACGGTCT CAGCACCAGC ACCAGCAGCA GCAGCGACGA CATCGAGGTC GTCGGAGAAG CCGCAGACGG CGCCGAAGCA GTCCAACGCG CCGGCGAGCT GGCTCCCGAC GTGGTGCTGA TGGACCTCTC CATGCCCGTC ATGGACGGGG TGACCGCTAC TGCGGCGGTG CTGGCCGCGG TCCCGGACAC CGCGGTGGTG GTCTTGACGT CCTTCATCGA CCAGGCTCAG GTCCGGCAGG CTCTGGCCGC TGGGGCGGTG GGGTACCTGC TCAAGGACAG CGAACCGCGT GAAGTCCTCA GCGCCGTCCG CTCTGCCGCT GCCGGTCACG CCCCCTTGGA CCCTCGCGTC GCCCGAGCCC TGCTGCCCGG GTCCCCCACT TCGCCCCCAC CGCCGCTGTC ACCGGGGCAG TCACCTCAGC CCCAGCATCC GGTGCAGCCC CAGCAGCCAG CGACGGGACT TAGCGGTCGT GAGCACGAAG TGCTGCAGCT GATCGCTGAG GGGCTGGCCA ACAAGCAGAT CGCCCGCAGC CTCGGCATCA GCGAGCACAC CGTCAAGGTC CATGTCGGGC GCATCCTGCG GCAGCTGGGT GTGAGCGGAC GCACCGCGGC TGCGGTGTGG GCTCGTGAGC ATCTGCCCCC TTCGGGAACT TCTTGA
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Protein sequence | MIRVLVVDDH RLVRAGLIAL LHAGDGLSTS TSSSSDDIEV VGEAADGAEA VQRAGELAPD VVLMDLSMPV MDGVTATAAV LAAVPDTAVV VLTSFIDQAQ VRQALAAGAV GYLLKDSEPR EVLSAVRSAA AGHAPLDPRV ARALLPGSPT SPPPPLSPGQ SPQPQHPVQP QQPATGLSGR EHEVLQLIAE GLANKQIARS LGISEHTVKV HVGRILRQLG VSGRTAAAVW AREHLPPSGT S
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