| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_4462 |
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| Symbol | |
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| ID | 5333799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kineococcus radiotolerans SRS30216 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009664 |
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| Strand | + |
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| Start bp | 2370174 |
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| End bp | 2371877 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001364185 |
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| Protein GI | 152968401 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0169439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00694206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCACGAGC CACCGGCGGG GGTGGACCTC GCCCGGGCGG TCCTGTCCGC CGCGGTGGGG
CTGGTGGTGA CCGACCTGCG GGGGCGGGTG CTGGGCGTCG ACGAGGCCTT CGCGGGGCTG
CTGCGCCGCC CGTCCGGCGA GGTCCTCGGG CGCGGGCTGG CCGAGGTGCT GTCCTCGGCC
GAGGGCGCCC ACGACGTCGA GGGCACGGTC GCGCGGCTGC TCGACGGGGA CCCCGCCGTG
ACCGGCGAGG TCCCGGTGCT GCGGGGCGAC GGGGTCGTCT TCCGCGCCCG GACCCTCTCC
TCGCTGGCCA CCACGTCCGG GGGGGACGCG GTGGTGGTGC TGCACCTGCT GGACGCGCAC
CGCGAGCGGC CGCGCGCGCC CGGCGACCAC GACCCCCTGA CCCGCCTGCC CGGCCGCGCC
GCGGCGGTCA CCGACCTCAC CGCCCGGCTG CGCGCCGGGA CCGGGCTGGT CGGCGTCCTG
ACCTGCGACC TCGACCGCTT CCGCGTCGTC AACGAGAGCC TGGGGCACGC CGTGGGCGAC
GAGGTCCTGC TCACCGTCGC CCGCCGCCTG CTGGCCGGGG TGCGCGGCGG GGACGTGGTG
GCGCGCCTGG GCGACGACGA GTTCGCGGTG GTGCTCGCCG GGCTCGCCGA CGCCGGGGAG
GCCGTCGACG TGGCGCACCG GCTCACCCGC GCCCTCGCCG CGCCCCTGGA GGTCCCCGGC
CCCGCGGGGC CGCAGGAGAT CCGCTGCGCG GTGAGCACCG GGCTGGCCGT GGTCGACCTG
GCGGCGCCCC TGCAGGGGGC CGGGCCCGGC GCGCCGGAGC TGGACGCGGC CACCCTGCTG
CGCGACGCGA ACACCGCCCT GGACGCGGCG AAGGCCGCGG GCGGCGGCTG CTGCCGGGTC
TTCACCGACG CCATGCGCCG CCGCGCCGTC CGCCGCCTCA CCGTCGAGAA CGACCTGCGC
CGCGCCCTGG AGCGCGGGGA GCTGCGGGTC CACTACCAGC CCGTGGTGCG GCTCGCGGAC
CGGCGGCGGA CCGGGTTCGA GGCGCTGGTG CGGTGGGAGC ACCCCGAGCG CGGGCTGCTG
CTGCCCGAGG AGTTCCTCGA CGTGGCCGAG GAGTGCGGCC TGGTGACGGC CGTCGACGCC
GCCGTCCTGG AGGAGGTGCT GGGCTTCCTC GCCCGCCACC CCGAGGGGCG GGTGTCGGTG
AACACCTCCG CCCGCCGCCT GGACGGGACG TTCGCGCCGG CCGTGGCCCA CGGGCTGGCC
CGGCACGGGC TCCCCCCGCA GCGCCTGGCC GTCGAGCTGC TCGAGACGTC CCTGGTCCCC
GGCGACGCCG TCACCGAGCG CGAGCTGCAC GACCTGGCCG ACCTCGGCGT CGAGGTCCTC
CTCGACGACT TCGGCACGGG CTACTCGGCG CTGTCCGACC TGCGCCGGCT GCCGGTGGGC
GGGTTGAAGC TGGACCGCTC CTTCGTCGGC GACCTGCCCG CCGACGCGAC CTCCGACCGC
ATCGCGGCCG CCGTGGTGGG CCTCGCCGTC GGCTTCGGGC TGTCCTCCAC CTGCGAGGGC
GTGGAGACCG CGGCCCAGGC CGCCCACCTG GCCGCGCAGG GGTGGCGCTC CGCCCAGGGC
TCCCTCTTCG GGGCCCCCGC CCCCGAGGAG CACTGGTTCC CCAGCCCGGC GGTCCCCGCC
GACGGGGTCC GGGCCTCGGC CTGA
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| Protein sequence | MHEPPAGVDL ARAVLSAAVG LVVTDLRGRV LGVDEAFAGL LRRPSGEVLG RGLAEVLSSA
EGAHDVEGTV ARLLDGDPAV TGEVPVLRGD GVVFRARTLS SLATTSGGDA VVVLHLLDAH
RERPRAPGDH DPLTRLPGRA AAVTDLTARL RAGTGLVGVL TCDLDRFRVV NESLGHAVGD
EVLLTVARRL LAGVRGGDVV ARLGDDEFAV VLAGLADAGE AVDVAHRLTR ALAAPLEVPG
PAGPQEIRCA VSTGLAVVDL AAPLQGAGPG APELDAATLL RDANTALDAA KAAGGGCCRV
FTDAMRRRAV RRLTVENDLR RALERGELRV HYQPVVRLAD RRRTGFEALV RWEHPERGLL
LPEEFLDVAE ECGLVTAVDA AVLEEVLGFL ARHPEGRVSV NTSARRLDGT FAPAVAHGLA
RHGLPPQRLA VELLETSLVP GDAVTERELH DLADLGVEVL LDDFGTGYSA LSDLRRLPVG
GLKLDRSFVG DLPADATSDR IAAAVVGLAV GFGLSSTCEG VETAAQAAHL AAQGWRSAQG
SLFGAPAPEE HWFPSPAVPA DGVRASA
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