| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3884 |
|---|
| Symbol | |
|---|
| ID | 5334838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 3015579 |
|---|
| End bp | 3017141 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001363611 |
|---|
| Protein GI | 152967827 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0180053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCA CGGCGTCGCG CACCCGGCGC CCCCCGGCCC CCGGCCCGGC CGTCCCGCGC
TCGCGGGCCC TGCTGCCCGC CCTGGGGGTG GGGGCCCTCG CCGCGGGGAC CTTCGTCCTG
GTGCACCGGG CGCTGGTCGA CGACGCCTAC ATCACCCTCG CCTACGCGCG GAACCTCGCC
CTGCACGGGA CGTGGGGCCT GCTCTCCGAC GTGGAGTCCA ACACCGCCAC CTCCCCGCTG
TGGGTGCTGC TGCTGGCCGC CGTGACCGCG GTGGTGCGCC GGCCGGTGGT GGCGCTGGGG
GTCCTGCACG TCCTCATGGC CGTCGGCCTC ACCCTGTCGC TGACCTCCGC GGCCCGGCGC
ACCGGGCTGC CCGCGTGGGT GGGTCCCGCC GCGGCCGTGG CGGTGGGGGT CAACCCGCTG
CTGCTGAGCT CCGTCGGCCT GGAGTCGGGC TTCCTCGTCC TGCTGCTGTC GCTGCTGCTG
CTGGCCGCCG TCCGCGGCGC CGCGCTGCCG TACGGGCTGG CCGCGGGCGC GGTCGTGCTG
ACCCGGATGG ACGCCGCCGT CGTCGTCGCC GTCCTCACCC TGCTCACCCC GGCCGTGCTG
CGGCGGCTGC ACGTGGCCGT CCCCGCCGCG CTGCTCGTCG TGGTGCCGTG GATGACCTGG
AGCTGGTTCC ACCTGGGCTC CGCCGTCCCC GACACCGTCG TCATCAAGAC GCTGCAGGAG
TCGTGGGAGC AGTACGACGT CCGCAACGGC ATGCAGCTCT ACGTCGAGGT CTACGGGCTG
ACCGCGGTCC TGGCGTTCCT GCCGGTGGTG CTCGGCGGGC TGGGGTGGTT CGTCCTCGCC
GCCCTGGGCT GGACCTCGCG CCGCTCGGCC ACCGCCCCGC CCAGCGGGCT GCGGGTGTGG
CCGTGGCTGG CGGTGGGGGT CGCCGGCGTG GCGCACTACC TCGCGCTGAG CGTCCTCGGC
GTCCCCCCGT ACCACTGGTA CTACGCCGTC CTCGTGGCGC TGTCGACGGT GGTGGGGGTC
GCCGCCCTCG GCGCGCTCTT CCCCCGGGTC GAGCTGCGCC CCGTCGGCCT CGGGGCGTCG
GCGGCCGCGG TCGTCCTCCT CGTGGCCAGC GCCGGGGTCG ACCTGCGCGC GGGGCTGCCC
TGGTCGATCG CGCCCATCCA GACCAACTGG GCCCACCCCG CGCGCTACAC CGAGATCGCC
CGCGACGTGC AGGCCGTCCT GGAGCAGCGC GGCGGCCCCC AGCACGTCAC CTCGCCCGGC
GAGGTCGGCC ACCTCGCCTA CGTCTGCGAC TGCGTCGTGG ACTACTTCGC CGACCCGGCC
CGCGTGCAGC CGATGATCGA CCAGGTCGAG GCCGAGTCCT CGCCGCTGGG GCGGCGGCTG
CTGGAGTGGA ACTTCACCCA CCGCGACGCG GACGCCGCGC CGGTCCCGGT GTCGGGGGAG
CTCTTCCGCT ACGACCGCGG CACCCAGCCG CCCGCGGCCC GGGGTCTGCC GACGTGGCCG
ATCACCACGA CCTGGGACAT GGTGCCCAGC GACATCGTCC TGCAACCGGT GGGTGGCGCG
TGA
|
|---|
| Protein sequence | MTATASRTRR PPAPGPAVPR SRALLPALGV GALAAGTFVL VHRALVDDAY ITLAYARNLA
LHGTWGLLSD VESNTATSPL WVLLLAAVTA VVRRPVVALG VLHVLMAVGL TLSLTSAARR
TGLPAWVGPA AAVAVGVNPL LLSSVGLESG FLVLLLSLLL LAAVRGAALP YGLAAGAVVL
TRMDAAVVVA VLTLLTPAVL RRLHVAVPAA LLVVVPWMTW SWFHLGSAVP DTVVIKTLQE
SWEQYDVRNG MQLYVEVYGL TAVLAFLPVV LGGLGWFVLA ALGWTSRRSA TAPPSGLRVW
PWLAVGVAGV AHYLALSVLG VPPYHWYYAV LVALSTVVGV AALGALFPRV ELRPVGLGAS
AAAVVLLVAS AGVDLRAGLP WSIAPIQTNW AHPARYTEIA RDVQAVLEQR GGPQHVTSPG
EVGHLAYVCD CVVDYFADPA RVQPMIDQVE AESSPLGRRL LEWNFTHRDA DAAPVPVSGE
LFRYDRGTQP PAARGLPTWP ITTTWDMVPS DIVLQPVGGA
|
|---|
| |