Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_2998 |
Symbol | |
ID | 5333704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 4004622 |
End bp | 4006454 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_001362726 |
Protein GI | 152966942 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.869563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0845343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTTTGG TGAGCACCCG CGCATCGCCT AGCGTCAGCC CCCCCGGTGC CCCGCACCGG GACGCGCACG ACCCGCAGAT GTCGACCCGC AGGAACCACG CCGGAACGAG GACGCAGATG TCGCCCGAGA TGCAGGACCC GACGCCCGAG AACGCGCAGC ACCCGTCGCG CCGAGCCTTC AGCCTCGCCG CCGTGGCGAC GGCCGGGCTG GCCACCCTCA CCGCCTGCGC GCAGAGCGAG CGCGACGACT CCGGGGACGA GGGGACCGAG GGGGGCGGCA GCACCCGCGA CACGTTCGTC TTCGGCGGGG CCTCCGACCC CGACTCCCTG GACCCGTTCT TCGCCTCCGA CGGCGAGACC TTCCGGATCA GCCGGCAGAT CTTCGAGGGG CTGGTCTCCA CCAAGCCCGG CACCACCGAC CTCGCCCCGG CGCTGGCCAG CGACTGGACC ACCTCCGAGG ACGGCCTCAG CTACACGTTC ACCCTGCAGG AGGGGGTGAC GTTCTCCAAC GGCAAGCCCT TCGACGCCGC GGCCGTCGTC GCGAACTTCG AGCGCTGGTA CAACCTCACC GGCATCGCCC AGGGCGAGGA CCTTGCGTAC TACTACCGCT CCATCTTCCG CGGCTTCAAG ACCAACGAGG ACGCCGCCCT CACCACCTCG CTGTACGCCG GGTCCACCGC GAACGCCGAC GGCACCGTCA CCGTCAACCT GACCTCGCCG TTCGCGGGCT TCCTGGCCGC GCTGACCCTG CCGGCCCTCT CGATGCAGGA GACGTCCGCG GTCGAGGCCG GCGGCGGCAA CGGCGCCGAC GGCAGCGACC CCCGGCAGAG CGCTTACGCC ACCTCCGGGC CCGTCGGCAC CGGGCCGTAC GTCTTCGACT CCTGGGAGCG CGGCCAGCAG GTCACCCTCA AGCGCAACGA GGAGTACTGG GGCGAGAAGG CCAAGACCCC CACCGCCATC GTCCGCTTCA TCGGCGACGG CACCGCGCGC AAGACCGCCC TGCAGAACGG CGACATCGAC GGCTACGACC TCGTGGCGCC CGCCGACGTG GCGACCCTGG AGTCGGGCGG GTTCCAGATC CAGAACCGGC CCGCCTTCAA CATCCTCTAC CTCGGCATCA ACCAGGCGTT CCCGCCGCTG CAGGACCTCA AGGTCCGCCA GGCCATCGCC CACGCCATCG ACAAGGACGC GGTCGTCAAG AACGCGCTGC CCGAGGGCAC CGAGGTCGCG ACCCAGTTCA TGCCGAGCAA CGTCATCGGC TGGAACGAGG GGGTCACCAC CTACGAGTTC TCCATCGACA AGGCCAAGCA GCTGCTCACC GAGGCCGGCC AGGCGAACCT CACCATCCCG TTCAACTACC CGACCGGCGT CTCGCGGCCC TACATGCCGA ACCCGGAGAC CATCTTCAAG GCCATCCAGT CGCAGCTGAC CGCGGCCGGG ATCACCACGA CCCCGGTGGC CGAGCAGTGG ACGCCGAACT ACCTCGACAC CGTCCAGGGC GGGGCCAACC ACGGCCTGCA CCTGCTCGGG TGGACCGGCG ACTACAACGA CCCGGACAAC TTCATCGGCG TGTTCTTCGG CGCGCAGACC AACGAGTGGG GCTTCAACGA CCCCGGGTTG TTCGAGGCGC TGGCCGCGGC CCGCACCGTC ACCAGCGAGG AGGAGCAGGA GAGCGCCTAC CAGGACATCA ACGAGCAGAT CATGACCCTG CTGCCGGGCA TCCCGATCGC CAGCCCCGTC CCGTCGCTGG CCTTCGCCGC CGGGGTCGAG GGGTACACCG CCAGCCCCGT CCAGGACGAG GTGTGGAACA CCGTGACGGT GTCCGACAGC TGA
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Protein sequence | MCLVSTRASP SVSPPGAPHR DAHDPQMSTR RNHAGTRTQM SPEMQDPTPE NAQHPSRRAF SLAAVATAGL ATLTACAQSE RDDSGDEGTE GGGSTRDTFV FGGASDPDSL DPFFASDGET FRISRQIFEG LVSTKPGTTD LAPALASDWT TSEDGLSYTF TLQEGVTFSN GKPFDAAAVV ANFERWYNLT GIAQGEDLAY YYRSIFRGFK TNEDAALTTS LYAGSTANAD GTVTVNLTSP FAGFLAALTL PALSMQETSA VEAGGGNGAD GSDPRQSAYA TSGPVGTGPY VFDSWERGQQ VTLKRNEEYW GEKAKTPTAI VRFIGDGTAR KTALQNGDID GYDLVAPADV ATLESGGFQI QNRPAFNILY LGINQAFPPL QDLKVRQAIA HAIDKDAVVK NALPEGTEVA TQFMPSNVIG WNEGVTTYEF SIDKAKQLLT EAGQANLTIP FNYPTGVSRP YMPNPETIFK AIQSQLTAAG ITTTPVAEQW TPNYLDTVQG GANHGLHLLG WTGDYNDPDN FIGVFFGAQT NEWGFNDPGL FEALAAARTV TSEEEQESAY QDINEQIMTL LPGIPIASPV PSLAFAAGVE GYTASPVQDE VWNTVTVSDS
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