| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_2761 |
|---|
| Symbol | |
|---|
| ID | 5333864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 4237355 |
|---|
| End bp | 4240084 |
|---|
| Gene Length | 2730 bp |
|---|
| Protein Length | 909 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | diguanylate cyclase/phosphodiesterase |
|---|
| Protein accession | YP_001362497 |
|---|
| Protein GI | 152966713 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTCCCT CCCTGCAGCG CAGCCTCCTG ACCCTGGTGC TCGTACCGGT CGTCGGCCTC
ACCGGCGCCG TCGCCCTGGC CGTGGACGCC AGCCGCGGCA TCTCCCGCGC CGCGGACACC
GCGGCCGCGC AGGTGCGCGC CGCCGCCCTG CTGGACACCG TGCGGGGCAG CATCGCCCAG
GAGGTCGTGC CGGTGCTGGG TCAGGCGGTG CTCGCCGATC CCGCCACCGC GGCCGCCGCC
GGTCTCGACG CCTCCGGCCT CGCGGGCATC GCCGACCTGG CCGGACCCGC CATCGCTCAG
CAGCTCGGTG CCGTCCAGGC CGCCACCGAC ACCGCCGTGG ACGCCACCGC CGGCACCGCC
GCCGCCGCCG GAGCCGCAGC GGCTGCGGCC GAGGTCGCGC AGCTGCGCGC GAGCGCAGCG
ACCGGCGGCG ACACCACGGT GCTCTTCACC CGCTACGGCG AGATCGTGGC CGACCTCACC
GGGCAGGTCG CGGACCACCT CGACGCCGCC CGCGACGAGT CCCTGGACGG GCCCGGGGCC
CGGGCGGTGA ACGACCTGGA CCGCGCGCAG GAGGCCGCGA CCTTCGCCAG CCTCCAGGTC
CCCCTGCTCC TGGGCTCGGT CTCGGTCCCG GAGGCCGGAC GGGACGAGGC CCGCGCCGCC
TTCCTGCAGG CCTGGGGCGG GTACCGCGCC GCCGACGCCG ACCTCACCGC CCACGCCGGT
CCCTCGGCGG TGGCGGCGTG GCGGAGCGCC ACCGGCAGCG AGGCCGCCGT GCAGGTCGAC
ACCCTCCTCG ACGCCGCGGC CACCGGGACC GGGACCGCCA CCTCCACCGC CTCGCCCGGG
GTGGCGCTGG CGCTGCCGCA GTTCCTGGCC CTCACCACCG CCAACACCAG CCGCGACGCG
GCTCTGCGCG AGGCGGTGGA CACCATCGGC GATCAGGCCG TGACCGCCAC CGACCTCCCG
GCTCAGCGAG CGGCGGCGGA GCTGCGGGCC CTGCTGCTGA TCGCCCTGGT GCTGCTGGTG
GTCACCGCGG GCGTCATGGG GTTGGTGCAC CGCTTCATCG CCCGCCCGCT GCGGCACCTG
GCTCAGCAGG CCGAGGCGGT GCGCGACGGC GAGCTGGACG CCGGGCTCCT CGACGTCGCC
GACGGCGGAC CCCGCGAGGT GCGCAGCGTG GCCCGGGGCC TGTCCGCCAC CGTGGCCAGC
CTGCGCCGGG TCCAGGCCCA GGCCCAGGCC GTCGCCGACG GCGACCTGGA CGCCGAGGTG
GTCCAGGAAC CGCTGGCCGG TTCCCTCGGC GCCGTCGTGC ACGCCTCCAT CACCCAGATG
ATCAGCGCCA TCCACGAACG GGAACGCCTC CAGGTCAGCC TCGCCCACCA GGCGTCCCAC
GACGCGCTGA CCGAGCTGCC CAACCGGGCC CAGGCCAGCG TCCTCATCGA ACGGGCCGTG
CACCGCGCCC GGCGCAACGG TCAGCACGTG GGCCTGCTCT TCGTGGACCT CGACCACTTC
AAGCAGGTCA ACGACACCCT GGGCCACGCC GCGGGCGACG AACTGCTGCG CGTGGTCAGC
GCCCGCATGG AGGAGACCGT GCGCGGCGGC GACGCCGTGT GCCGCCTAGG CGGGGACGAG
TTCGTGGTCC TCGTCGAACC GGCCGAGGAC CACCACCAGC TCGTGGAACT CGGCCAGCGC
CTCATCACCG CGATCTGCGC GCCGGTGCGG ATCGGGGACC GCGTCGCGCG TGTCGGGGCC
AGCATCGGCG TCGCCGTCAG CGGCGCCGGC ACCCACGGCA CCCCGGCCCA CGGGGCCGAC
ACCACCGCCG AACGCCTGCT GCAGGAAGCC GACGCCGCCG CCTACCGCGC CAAGGCCGCC
GGCCGCGGCG TGGTGGAGGT CTTCGACGAC GAACTGCGCC ACGAGCTGAG CGTGCAGGCC
CAGACCGAGG AGGCCCTGCG CCAGGCGCTG CTGGGGAACG AACTCGTCCT GCACTACCAG
CCGGTCCTGG ACCTGCTGAC CGGGCGCACC GCCAGCGTGG AGGCCCTGGT CCGCTGGAAC
CGGCCCGGGC ACGGCCTGGT CCCCCCGGAC GCCTTCATCC CCGCCGCCGA ACGCTCGGAC
CTGATCTGCG ACCTCGGCCG CTGGGCCCTG GCCGCCGCCC TGACCCAGCT CACGCAGTGG
GACGCCGCCG CCACGGCGGG CGCCGCCGGG GCCGGCGGTC CGGAGGGCGA ACTCGCGGGC
CTGGGGGTGG CCGTCAACAT CTCCGGGCGC CACCTCGCCA GCCGCTACCT CCTCGACGAC
GTCGCCGCCG CCCTCGCCAC CTCCGGGATC GACCCCGTGC GCCTGACCCT GGAGATCACC
GAGACGGTGC TGGTCGACGT CCCCTCCGCC CTGGACCAGC TGCGCGCGCT GCGGGAGCTG
GGCGTGAAGA TCGCCATCGA CGACTTCGGG ACCGGCTACA CCTCCATCGG CCAGCTGCCG
AACCTGCCGG TGGACATCCT CAAGATCGAC CGCAGCTTCG TCTCCTCCCC CGGCGCCGGG
CACGCCGACC TCGTCCGCCT CGTGATCTCC GCCGCCCACA GCTTCGACCT CGGAGTCGTG
GCCGAGGGAA TCGAGGAGAA CGACCAGCTG CACCGCCTCG TCGCCGACTC CTGCGACAGC
GGGCAGGGTT TCCTCTTCGC CCGCCCGACG GCACCCGCCG AGCTGACCAT CCCGCGCACG
TGCCCGGCCA CCGAGGACAG CAGCACCTGA
|
|---|
| Protein sequence | MAPSLQRSLL TLVLVPVVGL TGAVALAVDA SRGISRAADT AAAQVRAAAL LDTVRGSIAQ
EVVPVLGQAV LADPATAAAA GLDASGLAGI ADLAGPAIAQ QLGAVQAATD TAVDATAGTA
AAAGAAAAAA EVAQLRASAA TGGDTTVLFT RYGEIVADLT GQVADHLDAA RDESLDGPGA
RAVNDLDRAQ EAATFASLQV PLLLGSVSVP EAGRDEARAA FLQAWGGYRA ADADLTAHAG
PSAVAAWRSA TGSEAAVQVD TLLDAAATGT GTATSTASPG VALALPQFLA LTTANTSRDA
ALREAVDTIG DQAVTATDLP AQRAAAELRA LLLIALVLLV VTAGVMGLVH RFIARPLRHL
AQQAEAVRDG ELDAGLLDVA DGGPREVRSV ARGLSATVAS LRRVQAQAQA VADGDLDAEV
VQEPLAGSLG AVVHASITQM ISAIHERERL QVSLAHQASH DALTELPNRA QASVLIERAV
HRARRNGQHV GLLFVDLDHF KQVNDTLGHA AGDELLRVVS ARMEETVRGG DAVCRLGGDE
FVVLVEPAED HHQLVELGQR LITAICAPVR IGDRVARVGA SIGVAVSGAG THGTPAHGAD
TTAERLLQEA DAAAYRAKAA GRGVVEVFDD ELRHELSVQA QTEEALRQAL LGNELVLHYQ
PVLDLLTGRT ASVEALVRWN RPGHGLVPPD AFIPAAERSD LICDLGRWAL AAALTQLTQW
DAAATAGAAG AGGPEGELAG LGVAVNISGR HLASRYLLDD VAAALATSGI DPVRLTLEIT
ETVLVDVPSA LDQLRALREL GVKIAIDDFG TGYTSIGQLP NLPVDILKID RSFVSSPGAG
HADLVRLVIS AAHSFDLGVV AEGIEENDQL HRLVADSCDS GQGFLFARPT APAELTIPRT
CPATEDSST
|
|---|
| |