Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1627 |
Symbol | |
ID | 5335548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 578237 |
End bp | 579808 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | flagellar hook-associated 2 domain protein |
Protein accession | YP_001361377 |
Protein GI | 152965593 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.354456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCACGA TCTCTTCGTC CAGCGTCGAC GGCCTCGTCA GTGGCCTGCA GACCAGCAGC ATCATCTCCT CGCTCATCGC CGTGGACTCC GCCACCCAGA CACGGCTGAA GAGCAGCGTC AGCTCGACGC AGCTGAAGAT CACGGCCTAC CAGTCGGTTA GCTCCAAGAT GCTGGCCGTG CAGGAGGCTG CAACCAAGCT CCAGGCGGCC ACGGCCTGGA CTCCCACCAA GGCGACGTCC TCGGACAAGT CCGTCGCCGT CAGCACCACC GAGGCCGCTT CGGCGGGTTC GGTGAGCTTC TCGGTCACCG GGGTGGCGGC CGGCAGAACC GTCACCAGCG CGATCTTCAA CTCCAAGGCC GCCGACAAGG GCGCTGAGTT GACCAGCGCA CTCGGGGGTT CCCCCTTGGA CGTGGTGCGC AGCGACGGCA AGTTCGTCAC GATCACCCCC AGTTCGGGTG ACCTGGAGGC GGTGGCCAAG GCTGTCAACG ATGCTGCTGA CCTCGGTATC AAGGCGGTGG CGATCCGCGT CGGAGACGGG CAGTACCGGT TGCAGATCAC CTCAACGAAG ACCGGCGCCA GCGAGGGCGA TTTCAAGATC GTGCCCAGCG TGGGCGGCAA CGCGAGTACC GGCCGCGACG GGAAGCTTCG CGAGGTCGGC TTCGACGCCC AGGACTTCGC CGATTTGAAC GTCCAGGACG TGACTCGAAC CGGCGGTACG GGATATACCG CGTCCTCGTC GAAGGACGCC AGCATCCTAC TGGCTACCGG TGACCCGATG ACGTCTCCGA CCAACACCTT CTCCGACATC ATCGCGGGTC TGTCCTTCAC GGTCTCCGCG GAGTCGCCCT TCAAGGCGGA TGCGCCCACG GAGAGGGAGA AGGCGACGGT CTCCGTCGCT CCGAACAGCG CCGCGGTCGC TGCCTCGATG AAGGCACTCG TGGACGCGGC CAACGCCGCG CTCGACGACG TGGCCTTGCA GTCGCGGGCC GCGTCGGTAA GCGCCGACGG TTCCGTCACC GGCGGCGGCA CGCTGCGTGG TGACCCCGCG CTGCGGTCCC TGCGCAGTCA GATCATCGAG GCCGTCACCG GCAACATCAC CGCGACGGGC ATCAACACGT CCGCGGCCTC GTTCGGCGTC GAGTCCACCA GGGACGGCAA GCTCGTCTTC AAGGAAGGAT CCTTCCTCGC CGCCTACGAG AAGGACCCGA CCGGGCTGAA GGACCTCGTC GCCAAGCGGT CCACGACCGT TGTCGACGGC AAGACCGTCG TCGCAGACGA CGGCAAGGAC GGCATCGCCA CCCGCCTGAG GAACGTCGTG GACCAGGCCA TCGGCCGCAA GGAGGACACG GCCATCGGCC TCAAGGCGCT GGACGGGACG ATCACCCAGA TCATCACCAA CCAGAACATC TCGATCGCCG ACCTCAAGAA CCGCATCGCG GATTGGGACG TGAAGCTCAA GGACAAGCAG GCGTACTACC AGAAGTACTA CGGTGCCCTG GAAGTGCAGC TCGGCAAGCT CCAGAGCCAG TCGAGCTGGC TGGCCGGCCA GTTGAGCAAC CTCGGCTCGT AA
|
Protein sequence | MSTISSSSVD GLVSGLQTSS IISSLIAVDS ATQTRLKSSV SSTQLKITAY QSVSSKMLAV QEAATKLQAA TAWTPTKATS SDKSVAVSTT EAASAGSVSF SVTGVAAGRT VTSAIFNSKA ADKGAELTSA LGGSPLDVVR SDGKFVTITP SSGDLEAVAK AVNDAADLGI KAVAIRVGDG QYRLQITSTK TGASEGDFKI VPSVGGNAST GRDGKLREVG FDAQDFADLN VQDVTRTGGT GYTASSSKDA SILLATGDPM TSPTNTFSDI IAGLSFTVSA ESPFKADAPT EREKATVSVA PNSAAVAASM KALVDAANAA LDDVALQSRA ASVSADGSVT GGGTLRGDPA LRSLRSQIIE AVTGNITATG INTSAASFGV ESTRDGKLVF KEGSFLAAYE KDPTGLKDLV AKRSTTVVDG KTVVADDGKD GIATRLRNVV DQAIGRKEDT AIGLKALDGT ITQIITNQNI SIADLKNRIA DWDVKLKDKQ AYYQKYYGAL EVQLGKLQSQ SSWLAGQLSN LGS
|
| |