Gene Krad_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_1005 
Symbol 
ID5334416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp1272629 
End bp1273852 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content76% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001360757 
Protein GI152964973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.136029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00044241 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCGGGGT ACTTCGCGCT GCTGCGCGAT CCGTTGGTGG CTCGTCCGTT CGTCTCCTCG 
GTGGTGGCCC GCGTCCCCAT CGCCACGGCG CCGCTGGGGC TGGTGCTGCT GGTCCGCGAC
CAGCGCGACT CGTACTCCCT GGCGGGGATC GTGACGGGGC TGTTCGCCGT CGGGCTGGCC
GTGGGCTCGC CGTTCTGGGG ACGGGCGATG GACCGGCTGG GGCAGCCGCG CGTCCTGGTG
CCCACCGCGA CGGCCAGCGG GGTCCTGCTC CTGCTGCTGA CGATCGCCAC CGCGTGGTCG
TCGGTGCCGG TGCTCGTGCT GCCGGTGCTG GCGCTGCTGG CGGGGATCGC GTTCCCGCCG
CTGAGCCCGG CGATGCGCTC CACCTGGCGG GTGGTGGTCC GCGAGGAACG GGCCCGCCGG
CACGGCTACG CCCTCGACGC GGCCGCCGTG GAGACGATCT TCGTGGGCGG GCCGCTGCTG
CTGAGCGGGC TGCTGCTGCT CGGGGTGGCC GCCCTGCCGC TGCTGGTGAC GGTGCTGCTG
CTGGTGGGCG GGACCCTGGC CTACGTCCGC TCCCCCGGGG CGCGGCAGGC GCCGGTCGCC
GTCGACGAGG AGGCGCACGG CGGGGCCTCG GTCCTGCTGC ACAGCGCCGG GTTCGTCCTG
CTCATGGTCG TCATGGCGAC CATGAGCGTC GGCTTCGGCA TCCTCGACGT GTCCCTCGCG
GGGCTGACCG AGCACCTGCT GGGTTCCGCG GACCGCCTCG GGGTGCTGTT CGCCCCCATC
GCGGGCGGTT CGGCCCTGGG CGGGCTGCTC TACGGCAGCC GCAACTGGCG CAGCTCCGAC
CGGCGCCGGC TGCTGGTGTC GCTGTCGGTC TTCGGGGCGC TGCTGCTCGC GGTCGCCGCC
TGCGCCGGGG CGGACGTGCC GCTGGTGGTG CTGATGCTGG TCCTCTTCGC CACCGGCCTC
TTCATCTCCC CCAACCTCAT CGCCGCGCAG AGCCTGGTGG ACCAGCTCGC CCCGGCGCAC
CGGCTGGGCG AGGCGCAGGC CTGGCTGTCG ACGGCGATCA CCGCCGGGGC CGCGCTCGGC
AACGCGGCGG CGGGCCTGAT CCTGGACGCC GCCGGGCCCG GGGAGGCGCT GGCGACGGCG
GCCGGTGCGG TGCTGCTGGC GGCGGTGGCG TGCCTGGCGG CGCAGCGGGT GTGGGCCCGG
CGACCGGCGG CCCTGCCGGT CTGA
 
Protein sequence
MSGYFALLRD PLVARPFVSS VVARVPIATA PLGLVLLVRD QRDSYSLAGI VTGLFAVGLA 
VGSPFWGRAM DRLGQPRVLV PTATASGVLL LLLTIATAWS SVPVLVLPVL ALLAGIAFPP
LSPAMRSTWR VVVREERARR HGYALDAAAV ETIFVGGPLL LSGLLLLGVA ALPLLVTVLL
LVGGTLAYVR SPGARQAPVA VDEEAHGGAS VLLHSAGFVL LMVVMATMSV GFGILDVSLA
GLTEHLLGSA DRLGVLFAPI AGGSALGGLL YGSRNWRSSD RRRLLVSLSV FGALLLAVAA
CAGADVPLVV LMLVLFATGL FISPNLIAAQ SLVDQLAPAH RLGEAQAWLS TAITAGAALG
NAAAGLILDA AGPGEALATA AGAVLLAAVA CLAAQRVWAR RPAALPV