Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0899 |
Symbol | |
ID | 5334090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 1393025 |
End bp | 1393606 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
Protein accession | YP_001360651 |
Protein GI | 152964867 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00561968 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCACGCGG TGCGGCGCGC CGCGGCCTCC GGCGTCATCG ACGTCGTGGT CGTGGTCGCG CCCACCGCTG CGTGCGACGA GGTCCGCGCC CTGCTCGCGC CCCTGGTGCC CGGTGTCGTC GTCGTCCCGG GCGGGGCCGA GCGGCAGGAT TCCGTGCGGC GCGGTCTCGA CGCGCTGCCC GACGACGTCG ACGTCGTCCT CGTGCACGAC GCGGCCCGCT GCCTGACGCC CCCGGCCGTC TTCGCCGGCG TCGTCGCCGC CGTCCGGGCG GGGTCACCCG CCGTCGTACC CGTGCTGCCC GTCTCCGACA CCGTCAAGCG CGTCGCCGGG AACACCGTCG TCGAGACCGT CGACCGCAGC GAGCTCGTCG CGGTGCAGAC CCCGCAGGGC TTCGCCGCCG GTCCGCTGCG GGCCGCCCAC GCGGCCGCCG CGCCCGGTAC CGCCGCCACG GACGACGCCG GCCTGCTGGA GTCCCTCGGG CACCCCGTGC GCGTCGTCCC CGGCCACCAG CACGCCTTCA AGGTCACCCG CCCCGTCGAC CTCGTGCTCG CCCGCGCCCT GCTGGCCGAG GGGGCCCCGT GA
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Protein sequence | MHAVRRAAAS GVIDVVVVVA PTAACDEVRA LLAPLVPGVV VVPGGAERQD SVRRGLDALP DDVDVVLVHD AARCLTPPAV FAGVVAAVRA GSPAVVPVLP VSDTVKRVAG NTVVETVDRS ELVAVQTPQG FAAGPLRAAH AAAAPGTAAT DDAGLLESLG HPVRVVPGHQ HAFKVTRPVD LVLARALLAE GAP
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