| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0379 |
|---|
| Symbol | |
|---|
| ID | 5333590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 1923723 |
|---|
| End bp | 1924328 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | CMP/dCMP deaminase zinc-binding |
|---|
| Protein accession | YP_001360133 |
|---|
| Protein GI | 152964349 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00104836 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.131748 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCT CGGCGCTCAG CCACGCCTTC ACCATCGCCC TGCCCGCCTG GGTCGACGAC
GAGCTCGCCG ACGTGCCGGC CGTGCTGCGG ACCCGGGAGG AGCGGATGGC CCTGGTCCAC
CGCCTCGCCG GCCGCAACTT CCGCGAGGGC AACGGCGGCC CCTTCGCCGC CGTCGTCGCC
GACAGCGGTT CCGGCGAGAT CGTCTCGGTG GGCGTGAACG TCGTCCTCTC CACCGGCATC
TCCTCCGGCC ACGCCGAGGT CGCGGCCCTC GGCCTGGCCC AGGTCCGCAC CGGCTCCTGG
GACCTCGGCG CCGACGGCGC CCGCCGCGAG CTCGTCGTGA ACTGGCGCCC GTGCGCCCAG
TGCTACGGCG CGACGCTGTG GTCGGGGGTG CGCACCCTGG TCGTCGCCGG GTCCGGTCCC
GAGCTGGAGG AGATCACCGG TTTCGACGAG GGTCCCGTCC GCGAGGACTG GGCCGCGCAG
TTCGAGGCCC GCGGCATCGC CGTGGTCTCC GACGTCCTGC GCGAGGAGGC CCTGGCGGTC
TACCGCGACT ACGCCGCCCA CGTCGCCGCC ACCGGCGCGA CCGTCTACAA CGCCCGCACC
GACTGA
|
|---|
| Protein sequence | MDTSALSHAF TIALPAWVDD ELADVPAVLR TREERMALVH RLAGRNFREG NGGPFAAVVA
DSGSGEIVSV GVNVVLSTGI SSGHAEVAAL GLAQVRTGSW DLGADGARRE LVVNWRPCAQ
CYGATLWSGV RTLVVAGSGP ELEEITGFDE GPVREDWAAQ FEARGIAVVS DVLREEALAV
YRDYAAHVAA TGATVYNART D
|
|---|
| |