| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2555 |
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| Symbol | |
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| ID | 8381708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2747492 |
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| End bp | 2748439 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645005320 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_003162490 |
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| Protein GI | 256833763 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000456374 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.353956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATTTCT TCGCGTTCCT CGCGCCCATC GAATGGGCTG TGGCATGGAT TATGTATCTA
TGCCACACGT TCTTTGTCTT CCTTGGACTG CCTGATGGGT CCGGTGTTGC ATGGATCCTT
GCAGTCGTTG GTCTCACCAT TGTGATCCGG GTGTTGATCA TCCCGCTGTT CTTCAAACAG
ATCAAAGCAT CCCGGGCCAT GCAGATGATC CAACCCGAAC TGCAGGCAAT TCAAAAGAAG
TACAAGAATA AGACTGATCC CGCATCCCGT GAAGCCATGG GACGGGAAAC CATGGCACTG
TACTCAAAAC ACGGCACAAA CCCGCTGGCG TCATGCATGC CTATTCTGTT GCAGACGCCC
ATCTTCTTTG GTCTTTTCCG TGTGCTCAAC GGTCTCGACG AAATCGCCGC TGGCGGTAGT
GCAATTGGCC CAATTAATAC CGAGGTTGCC ACTCAGATTG AGAACTCGCA GCTTTTTGGG
GCGAGTTTGT CGTCAACTTT CCTTCACGAG CCAACAGACC CGAACACAAA GATCGTGTCT
GCTGTTCTTA TCGTGCTCAT GTGTGCCACG CTTTATATCA CACAACGCCA ACTCACTATG
AAGAATATGC CTGCATCTGC GATGCAGGGC CCCATGGCGC AAACCCAAAA GATCATGCTT
TACCTCATCC CCGGGATGAT GGCCGTGTCC GGTGTGAACT TCCCCATCGG TGTGCTGATC
TACTGGGTCG TTTCTAACCT CTGGTCAACT GGCCAGCAGT TCTACACCAT CAACCGTATG
CCCACTCCAG GTTCCGAAGC AGAAAAACGC ATGAATGAGC GCAAGGCTCG GAAAGCTGCG
AAGAAGGGCA TCATCATTGA AGAACCAGAA AAACCCACCG TCATCGAACA GCCCCGCGGA
CAACGCGAAC AGCCGCAGCG GAAAAACCGA CGCAAGCGGA AGAAGTGA
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| Protein sequence | MDFFAFLAPI EWAVAWIMYL CHTFFVFLGL PDGSGVAWIL AVVGLTIVIR VLIIPLFFKQ
IKASRAMQMI QPELQAIQKK YKNKTDPASR EAMGRETMAL YSKHGTNPLA SCMPILLQTP
IFFGLFRVLN GLDEIAAGGS AIGPINTEVA TQIENSQLFG ASLSSTFLHE PTDPNTKIVS
AVLIVLMCAT LYITQRQLTM KNMPASAMQG PMAQTQKIML YLIPGMMAVS GVNFPIGVLI
YWVVSNLWST GQQFYTINRM PTPGSEAEKR MNERKARKAA KKGIIIEEPE KPTVIEQPRG
QREQPQRKNR RKRKK
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