Gene Jden_2484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2484 
Symbol 
ID8381637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2667383 
End bp2668807 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content60% 
IMG OID645005249 
ProductGlutamyl-tRNA reductase 
Protein accessionYP_003162419 
Protein GI256833692 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.474663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.682056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTTTCG TATCTATGAC TGCGAGCCAC CATGAGCTGG ACCTCGAAGC CCTCGAACAA 
CTCTCGCAGG GGGCACGTTC TGCGTCGAGG AACATCATGG CGGCCTGCCC CGGAGTGACC
GGTTCCGTTG TTGTTGCAAC GTGCAACCGG TTCGAGGTGT ACCTGGACAC CAACGACCAA
GTGCTTGCGT CCACGTCACG TGAGGACATT CGGGTCGATG GTGGGTTGAG TCATGCCGTG
ACTGAAACGA TCAGGTTGAT TGCTCGGGAG TCGGGAGTGG CTCCGGAGCG TGCCCAGCAG
GCGTTTACAG TACGGTCGGG TGCTGAGGTT GTGTCCCATT TGTTTGATGT GGCTGCTGGG
CTTGATTCCA TGGTTGTTGG GGAACGTGAA ATTGCGGGTC AGGTCCGGCG AGCGTTAGAC
ACTGCCCATA GTGAGCGGAC AACAAGCCCA CGGTTGGAGC GGTTGTTTCA GCGTGCGTTA
CACACCTCGA AAGCGGTGGC GAACCAGACA CAGTTGTCTG CGCAGGGCCG TTCGATTGTG
TCGGTTGCGC TGGATTTGGC GGAACCATCG GTGCCGCACT GGCCGCAGAC TGCGGCTCTT
GTTGTGGGCA CTGGGGCGTA TGCGGGGGCT ACAGTCGCAG CGTTGCGGTC ACGGGGGGTC
ACTGACATTA GTGTGTTTTC GCCCTCGGGG CGTGCGGAGG TGTTTGCGCA GTCTCATCCT
GTGACGCCGG TCCATGATCT GCTGGATGCA GTCAGTAACA GTGACATTGT GTTGTGTTGT
TCGGGGATTG GGCCGCGTCG TGCCGCGGTG GTTGACGTAC GTGGTGAGGG TCAGCCCACT
CCAGCTGTGG AGTATGTGTT GGAGCAGGCA GCTGTGGCAG CAGCGCGTGA AGATGTTGCG
GGTTTGGCGG GCGACGCTGA GGGTGATGAG TTCCCGCTGG TGATTGTGGA TTTGGCGTTA
CACCGGGATG TGGACCCGCA GGTGGCGGAT TTAGATGCGG TGGTCCTCAT GGATTTGGGG
ACGATTCGCG CGAACGCGCC TGAGGTGGCG GACACGTCGG TTCGTGCTGC TCGGTCACTG
ATTGGTATGG CAACGGATGA GTTTGTGCAG GCGGAGCGGG TGCGCCGAGC TGATTCGGTC
ATTGTTGATG TGGTGAACAG GGTTGAGGCT GCTCGTGCTG CCCGTATTTC TTGGGAGTTG
GCTCAGGCGG CTGACGGGGC CGGTGGGCAC GGTGATGAGC GTACTCACGA CTGGGTTGTG
CGCAAGGTGC ATGCCCGGGC GGGCGAGTTG TTGCATCGGC TTATTTCCGA TGTGCGTGCC
CGGTTGAATG CTGGTGTTGC GTTACCGGAT TTGCTTGATG ATGCAGCGGT GAGCCGAGAT
ATTACTGAGG TGTTGGGTGT TCCAGTGGAC CACCCCAACT CCTGA
 
Protein sequence
MVFVSMTASH HELDLEALEQ LSQGARSASR NIMAACPGVT GSVVVATCNR FEVYLDTNDQ 
VLASTSREDI RVDGGLSHAV TETIRLIARE SGVAPERAQQ AFTVRSGAEV VSHLFDVAAG
LDSMVVGERE IAGQVRRALD TAHSERTTSP RLERLFQRAL HTSKAVANQT QLSAQGRSIV
SVALDLAEPS VPHWPQTAAL VVGTGAYAGA TVAALRSRGV TDISVFSPSG RAEVFAQSHP
VTPVHDLLDA VSNSDIVLCC SGIGPRRAAV VDVRGEGQPT PAVEYVLEQA AVAAAREDVA
GLAGDAEGDE FPLVIVDLAL HRDVDPQVAD LDAVVLMDLG TIRANAPEVA DTSVRAARSL
IGMATDEFVQ AERVRRADSV IVDVVNRVEA ARAARISWEL AQAADGAGGH GDERTHDWVV
RKVHARAGEL LHRLISDVRA RLNAGVALPD LLDDAAVSRD ITEVLGVPVD HPNS