Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2394 |
Symbol | |
ID | 8381548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 2559337 |
End bp | 2561388 |
Gene Length | 2052 bp |
Protein Length | 683 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645005155 |
Product | Alpha-glucuronidase |
Protein accession | YP_003162330 |
Protein GI | 256833603 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3661] Alpha-glucuronidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.278359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTGG ACACCACCGC CCACACTGCC ACCTCTCCCC ACCCCGCATG GCTCCCGCCA ACAACCCTGG CACGCCTCGG CGACCTCACC ACCACCCTCG ACATCCCGCC ACACCTTGCC GACCACCCCG TGATCACCAC CCTGCGCAGC GAAATCACCC ACGCAGCACA CAACGCAACC ACCACGGAGC ACCCGGGGCG CGCATCGGCA ACCACCACCA CATCACGCAC CCTCACCCTG CGGCTCACAC CCCCCACAGG CGCCACCAAC CAACCCGCAT CAACACAGTT CCTCGGTGAC CCCCACGATG ACGCCTACAC ACTCACCACC ACACCCGACA CCATCACCGT CACCGGACGC ACCCCCAACG CACTGCTCTA CGGTTACTTC GCCCTCCTCC GCCACGACCT CACCACACTG CCCCCCACCA GTAAGCACAC CCCCGCCACC GCGATCCGCA TGCTCGACCA CTGGGACAAC CTCAGTGTTC ACCCCGTGAT GGGACAGATC GAACGCGGAT ACGCTGGCGA CTCCATCTTC TACACCAACG GCGCGGTCCG CGAGAACCTC ACCCGCGTCG CCGACTACGC GCGCCTCCTG GCGTCACTGG GCATCAACCA CGTCGCCATC AACAACGTCA ACGTGGAACG TGACGCAGCC CGCCTCCTCA CCGACAACAT CAACGACGTG GCCCGCATCG CCGCGATCTT CCGGAACTGG GGCATCCGCA CCCACCTGTC CGTGAGTTTC GGTTCTCCCA TGTCCCTGGG CGGCCTGACC AGCAACGACC CACTAGACCC ACAAGTGCGC CAATGGTGGG CCGACACTTT CACCGCCGTC TACTCTGTCA TCCCCGACTT CGGTGGCATC GTCATCAAAG CAGACTCCGA AGGACAACCC GGCCCCTTCG CCTACGGTCG CACCCACGCT GACGGCGCCA ACATGCTCGC CGAGGCGCTC GCGCCACACC ACGGAATCGT CCACTGGCGG GCCTTCGTCT ACAACCACAC CCAGGACTGG CGCGACCGCA CCACTGACCG TGCCCGCGCA GCCTACGAAC ACTTCGCCCC ACACGACGGC ACCTTCGCCG ACAACGCCAT CGTCCAAATC AAGTTTGGCC CCATGGACTT CCAAGCCCGC GAACCCATCT CCCCCACATT CGCGGCCATG CCCCACACCA ACTTGTCCCT CGAATTCCAA GTCACCCAGG AATACACCGG GCAACAACGG CACATCTGCT ACCTCGGAAC CCAGTGGTCG GAGATCATGC GGTTCACCTT CTGGCCAACC AGCAACCCCC ACACCACCCT CGCTGACATT CCTGTGTCCT TCACCGCCGT CTCCAACGTG GGAATGAGCG CCTACTGGAC TGGTCACCCC CTCGCCCAAG CGAACCTGTA CGCCTACGGG CGGCTCACCT GGGATCCCAC AGCAGACCCC GGTGACATTC TCACCGAATG GCTCACCCTC ACCTTCCCCC ACACCCCAGC AGCCACGCGC ACAACACTGC ACCACATCAT GGCGTCGTCT TGGGACACCT ACGAAAAATA CACCGCCCCC CTGGGGGTCG GTTTTATGGT CTCCCCCGGT GCAGCACACT ACGGCCCCCA CATCGACGGG TACGAATATT CCCCCTGGGG CACCTACCAC TTCGCGGACC GTGACGGTGT GGGTGTGGAC CGCACCCGAA CCGGCACCCG CTTTGTGGAC CAGTACCCGC CCGAACTCGC TGACCAGTAC AACAACCTCG ACACCTGCCC GGACGAACTG GTGTTGTTCT TCCACCATGT TCCTTACACC CACGTTCTCC ACTCCGGGAA AACGGTGATC CAACACATCT ACGACACCCA CTTTGAGGGA GTCGACAAGG TTCTTGACTA CCAACGCACC TGGGACAACC TCCGTGACAC GATCCCCACC GCGGTGTTCG AGGAAGTAAG CACCCGCCTG ACCGAGCAAG TCCGCTGCGC ACACGAATGG CGCGACCAGA TGTGCACCTA CTTCTTCCGA AAGTCAGGGA TCCCCGACAC CCACGGACGC ACCATTTACT AA
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Protein sequence | MSLDTTAHTA TSPHPAWLPP TTLARLGDLT TTLDIPPHLA DHPVITTLRS EITHAAHNAT TTEHPGRASA TTTTSRTLTL RLTPPTGATN QPASTQFLGD PHDDAYTLTT TPDTITVTGR TPNALLYGYF ALLRHDLTTL PPTSKHTPAT AIRMLDHWDN LSVHPVMGQI ERGYAGDSIF YTNGAVRENL TRVADYARLL ASLGINHVAI NNVNVERDAA RLLTDNINDV ARIAAIFRNW GIRTHLSVSF GSPMSLGGLT SNDPLDPQVR QWWADTFTAV YSVIPDFGGI VIKADSEGQP GPFAYGRTHA DGANMLAEAL APHHGIVHWR AFVYNHTQDW RDRTTDRARA AYEHFAPHDG TFADNAIVQI KFGPMDFQAR EPISPTFAAM PHTNLSLEFQ VTQEYTGQQR HICYLGTQWS EIMRFTFWPT SNPHTTLADI PVSFTAVSNV GMSAYWTGHP LAQANLYAYG RLTWDPTADP GDILTEWLTL TFPHTPAATR TTLHHIMASS WDTYEKYTAP LGVGFMVSPG AAHYGPHIDG YEYSPWGTYH FADRDGVGVD RTRTGTRFVD QYPPELADQY NNLDTCPDEL VLFFHHVPYT HVLHSGKTVI QHIYDTHFEG VDKVLDYQRT WDNLRDTIPT AVFEEVSTRL TEQVRCAHEW RDQMCTYFFR KSGIPDTHGR TIY
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