| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2363 |
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| Symbol | |
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| ID | 8381518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2526099 |
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| End bp | 2527277 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645005125 |
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| Product | Sarcosine oxidase |
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| Protein accession | YP_003162300 |
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| Protein GI | 256833573 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01377] sarcosine oxidase, monomeric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.182058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.337109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGCCC AATGGGACGT GGTCATTGTG GGCGGCGGGG CAATGGGTTC CGCCGCCGCA
TGGCAGTTGG CCCGGCGTGG GCGTTCAGTG GTGGTGTGTG AACAGTTTTC TGTGGGGCAC
ACGCGCGGGT CCTCACATGG GGGGTCCCGT ATTTACCGGA CCACGTATGC GCAACCCGAG
TATGTGGGGT TGATGCGGCA GGCGCTAGGG GAGTGGGACC TCCTTGAGGC GGAGTCGGGT
GTGAACCTGC TCAGCAGGGT GGGGTTGGTG TCCCACGGTT TTCCGCCCGT GGATTTCGAA
CAGCCGATGC GCGATGCGGG TATCCCCGTT GAGGTGCTGT CCGCTGTTGA GGCGCGGGAA
CGCTGGCCCG GGATGCGCTG TGAGGGCAAG GTGTTGTTTG AGCACAGTAC GGCGGGGCGT
GTGAATGCGG ACTTGGCGGT GGCGGTGCTG CAGCAGGAAG CTGTCCGGCA CGGCGCGCAG
GTGCGTCACA ATACCCGGGT GATTGATGTG CGTCAGCACC CAGGGTTCGT TGAGGTTGTC
ACTGAGGGGG AGACACTCAC AGCGTCACGG GTGGTGTTAG CCACGGGCGG GTGGATGAAT
GCTCTCGCGC CAAGGGCCAC TGGTGTGGAT CAGGCGTTGC CGTTGGATGT TATTGAGGTC
GCCCCAGCGC ACTTTGCGCT CGCGGAGTCT TTGCCGTCGG GGGACCCAAA CCCCATGGCT
GAGGATACGT GGCCGTCGTT CACACACGAT CATGCCCCAA CGCACCCGGT CACAGGTGAA
CCGACTAGGT GGCCTGGCAT TGTGTACGGG TTGGCGACCC CTGGTGAGGG CATCAAAGTG
GGGTTCAACG CCTATGGTCG CACCGTCACC GCTGACACGC GTACTTTCAC TTACGCCGCT
GGTGATGACG CGTTGCACCG CGATTATGTG CGGCAATGGT TGCCGGGGTT GAACCCGGAT
GCCAGCGAGT TTTTGTCCTG CACCTACACC AAAACACCGA GCAACGATTT TGTTCTTGAC
CGGTGTGGGC GGGTCGTGGT GGCGTCACCG TGTTCTGGGC ATGGTTTCAA GTTCACGCCC
ACCTTGGGTG GGTTGATCGC TGATCTGGCC ACGGAACCAG ACGATGCGCC AACGTCGTCG
GTCCCTGAAC TGTTTCGGTT GGCCCATCAC CTGAGGTAG
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| Protein sequence | MSAQWDVVIV GGGAMGSAAA WQLARRGRSV VVCEQFSVGH TRGSSHGGSR IYRTTYAQPE
YVGLMRQALG EWDLLEAESG VNLLSRVGLV SHGFPPVDFE QPMRDAGIPV EVLSAVEARE
RWPGMRCEGK VLFEHSTAGR VNADLAVAVL QQEAVRHGAQ VRHNTRVIDV RQHPGFVEVV
TEGETLTASR VVLATGGWMN ALAPRATGVD QALPLDVIEV APAHFALAES LPSGDPNPMA
EDTWPSFTHD HAPTHPVTGE PTRWPGIVYG LATPGEGIKV GFNAYGRTVT ADTRTFTYAA
GDDALHRDYV RQWLPGLNPD ASEFLSCTYT KTPSNDFVLD RCGRVVVASP CSGHGFKFTP
TLGGLIADLA TEPDDAPTSS VPELFRLAHH LR
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