| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2351 |
|---|
| Symbol | |
|---|
| ID | 8381506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2511747 |
|---|
| End bp | 2512856 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645005113 |
|---|
| Product | phosphoribosylformylglycinamidine cyclo-ligase |
|---|
| Protein accession | YP_003162288 |
|---|
| Protein GI | 256833561 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
|---|
| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.304441 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCACAC GCATCACTTA CGCTGGAGCT GGTGTTGATA CAGCAGCCGG GGACCGTGCC
GTTGAACTGA TGAAGAGCGC TGTTGCGCGT ACCCACGGCC CACACGTGCT GGGCGGTGTG
GGTGGTTTTG CCGGACTTTT TGATGCGTCC ATGCTCAAGG ATTACACGCG TCCGCTCTTG
GCGTCCTCGA CTGACGGTGT TGGCACGAAG GTGGCCATTG CTCAACAACT CGATATTCAC
CACACCATTG GGGCTGACCT CGTGGGGATG GTTGTTGATG ACATCGTTGT GTGCGGGGCC
CGCCCACTGG TCATGACAGA CTACATTGCA ACCGGCAAAG TGGTTCCGGA GCGTATTGCG
GACATTGTTC GCGGTATTGC GGCAGCGTGT GAAGAAACCG GTACCGCTCT TGTGGGTGGG
GAAACCGCGG AGCACCCAGG TTTGCTGGCT GAGAACGAAT ACGACGTCGC TGGTGCGGCT
GTGGGTGTGG TCGAGGCTGA TGCGCTTCTT GGCCCAGACC GGGTGCAGGA TGGTGACGTT
GTCCTTGCCT TGCCATCCTC GGGTTTGCAC TCCAATGGGT ATTCGCTGGT TCGTGCCATC
ATTGCGCATG CGGGGTGGAC GTTGGACCGT GAGGTCGCCG ACTTCGGGCG GACGCTAGGC
GAGGAGCTTC TTGAGCCGAC CCGGTTGTAT ACCACCCCAT GCTTGTCGCT TGCTGATGCG
CTCGGTACTG ACATGCGCGC GTTCTCCCAT GTCACGGGGG GCGGGTTAGG GCAAAACTTG
GCTCGTGTGA TCCCCGTTGG GTTGAGTGCC ACAGTGGATC GCTCTTCGTG GGATATTCCG
CCGGTGTTCG CGGTCATGCA GGCGTTGGGT GATGTGCCGT GGACTGACTT GGAAAACACC
TTGAACCTGG GGGTGGGGAT GGTTGCCATT GTGGCACCGG AATCTGTCGA TGCGGCGGTT
GCGAATCTTG CTGCGTCCGG TTTGCCTGCG TGGGAGCTAG GGCGCGTGTC GAGCGTAGAG
AAGCCTGCTC CGGATGGATC GACGCTCATT ACCGGTGCGA AAGGTGTCCA CGGCGGCCAG
GTGGCTCTGA TCGGAGACTA CCGCGTGTAA
|
|---|
| Protein sequence | MATRITYAGA GVDTAAGDRA VELMKSAVAR THGPHVLGGV GGFAGLFDAS MLKDYTRPLL
ASSTDGVGTK VAIAQQLDIH HTIGADLVGM VVDDIVVCGA RPLVMTDYIA TGKVVPERIA
DIVRGIAAAC EETGTALVGG ETAEHPGLLA ENEYDVAGAA VGVVEADALL GPDRVQDGDV
VLALPSSGLH SNGYSLVRAI IAHAGWTLDR EVADFGRTLG EELLEPTRLY TTPCLSLADA
LGTDMRAFSH VTGGGLGQNL ARVIPVGLSA TVDRSSWDIP PVFAVMQALG DVPWTDLENT
LNLGVGMVAI VAPESVDAAV ANLAASGLPA WELGRVSSVE KPAPDGSTLI TGAKGVHGGQ
VALIGDYRV
|
|---|
| |