Gene Jden_2322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2322 
Symbol 
ID8381478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2488158 
End bp2490806 
Gene Length2649 bp 
Protein Length882 aa 
Translation table11 
GC content60% 
IMG OID645005085 
Producthypothetical protein 
Protein accessionYP_003162260 
Protein GI256833533 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.219432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTA CACCTTTCCC GACACAGGGC CAATACCCTT GGTACGACCA ACTTGAACAG 
TGGGGCGCGG ACACACAAGC CGCCGCCGAA TCCGCTGAAC TAAACGCGGA TGCTTTACGA
GCAGACGTAG CAACCGCACT CAGCGACTCA ACCGCCGCGA GTGCCGCCGC CATTGCTGCT
GCAGGTCTCG TGGGTGCGCC TGCTGGGGAG GCTGTGCTCG CGGCCGTCTC AGAAGGAGGG
GCCGCCTATG GTGAGTTGAC CCGCTCGTTT ACGCAAATCC GGCAAACGGA CTTAGCTTCA
TTCCTTGAGC CCGGCGAAGT GCTACCTAAC GATGGTGTAA TGGATGCGTA TCCGCTGTTT
CAGCGCGCGG TTGACGCAGT CACCGCGCAA GGGGTTCCTA AGACGATCGC TATCCCCAGC
GGGAAATACC GCATACAGTC CTCGGTGCGG TGGCGCACCG GGTCTCATGT CGGATTTGTG
GGGGCGGGTC GGGAAAATAC GCGAATCCTT CCAGAAGGAT CAGCCGTATT TGGGATCATG
GACCCGAGCT TCGATGACAC TACAACGCTC AATGGCCTCC ATTTCGCGGA TTTCACCATC
GATTGCAGTG GCCAGACCGG CCCTATGGAT CAGGTGGGCA TTAAGGGGAT CGCCCTGCGT
TGGCTTGTCG ATTCCCGTTT TGACCGGGTG CGAATCTTAA ACTCATGGGC GACCTCATTC
GGGTGCGACT TCCTCCGCAA CGTCACCTTC GCGGACTGCA CGGCGATCGG CTCTGGTCGC
GGCGCGATCA GCAGGCATTC GTTCGGTGCC GGATTCGGGA TCGGAACCGG CGCGTTCGAG
AATGAGACTG TCCGTTTCGA GTCCTGCTAT GCGGAGGGCG CGCGTTCGTC CGGGTTCTTC
GTCGAAAACC TCATCAGCAC CCCTAACGGT GTGCGCGGCG AGGGGGCTGG GTTCATCATG
ACCGGCTGTG TTGCTGTCGG CAACTGGAAC GGGCTGCGCG ATTTCGGCGC AGAGTCGTCC
GTGATTACCG GGTGCCAGTT CATTGATAAC GAGAACGCTG GAATCAGCAT CGACGGTGGC
TCCCAGGCTG GCAGGCACGG AGGTCGCAAC AACCTCGCGA CGGGCAACAT TATCCGTGGC
AACAGCGTCG GTGTGCTTGT CGGTGACGCC GCAGTGGGTT CTTACACGTT TGCGGATAAC
GAAATTGTGG GAAACACTCT CGCAGGATGT CGAGTTACCG GTCGGATCGG TGAAGGGTGG
ATCTGGCAGG GCAACCGTAT CAGCCAGAAC GGCGCGGGAG GGATCGAGAT CCTTTCTCCC
CTAATTTCCC TCCCACAGAT CACAAACAAC GTGATCCGAG AGAACGGGAC CGGAGACGGC
ATATCAATGG TTGGTGACAC TGTGGAACCG GTTATCAACG GGAACACGAT CTCAGGCCAT
CGCGGCGCTG GTATACGCCT TCCTGGTGAG TCATCGTTCA TGACCACGCC AACGATACGC
AACAACAACA CCTCGGAGAA CTCGCTGGGC AGCCTGGTGA ACGAGAAGGT CACGGATGAT
ACTGCGCATA TCGCAGGGAA CCGGGCAGGA GCATCCTTCT CGACGCTCAC CAACCTCAAT
CCGCGTCCGT CGTTCCAGGA CGGCTCGATT GGGCCGGTAA CCGTGATCAC GCGTTTCGAG
GCTCCCGTGC CGCTGTTGGA CGAGGAACGC GGATACGTTC GTCTCATCGC AATGGGGAAC
TCTCCGACTG CTCGTGTGAT GCGCGTGAAC GCTGCACTGT CCGGGCCGCT GACCGTCTCC
GCATGGGTTC GCGCCACCAG AGATACCCGC ATCCGTGCGG CCGTCTCTGG GAGGTGGGCA
GCGGGCACGC AAAGCCGCAA CTGGCAGCAG GGCGGCGTGG AGGCCACGGG GGATTGGCAG
CGCGTCCATG TGACGTTCGT GCTTCCAGCC AACGGGTCTG GGGCTGACTT GACTCTTTCC
ATCGACAACA CCGAAGCGGG AGGCGTGCTC GATGTGCGTG ACATCCTGCT GACCCCCGGC
GTGACCCTCT GGGGCTACTT CGACGGAGAC TCAGTCGGTG CCGAATGGAC CGGCGCAGCA
TACGAATCTA CGTCGGTGCT CACTCTTTCG GAAGTGCCAA TCAGTCTTGA AGATCGGCTC
TTTTCGCTTA CTGGGCAAGT GCCGCTAGTA GAAAAAGTAG GGTCTGGCAC CACGGGAGGT
CTGACTGAAA CAGCTGCTCA GCCACTAACG ATGTACGCGG TCTTTGCGTC TGCCCCGTCA
GGGGTCCGTG CCCGCTTGCG TAGTGCAGTA AACCCCGCTA CTGACCGGTT CGCCATAGGT
AGGAATGGCG CTGGCAACGC GTGGGTGGCC GTCGCGACAG ACACCACCGA GGCCACAAAA
TTTGCGGCAG TAAACATGGT GGCAGGCCCC GCAGTTATTG CAGGGGTCCG CGAGGAAACC
ATTATCACCG TTGACGTTCA CGGGGAGTCA TCTAACTCGA TTGAGGTCGA TGGATTCAAT
GCAGTTCCTT TGGCGAACAT AAATAATGAC GCCTCGGTAG TGCACTCGCT CGTTTACTTG
GGGGCGCATG AAGCGGGGGT CCGGTCCGCT GTGATGGACG CCCTGGCCGC TGAGTATGGC
ATCGCTTAA
 
Protein sequence
MSITPFPTQG QYPWYDQLEQ WGADTQAAAE SAELNADALR ADVATALSDS TAASAAAIAA 
AGLVGAPAGE AVLAAVSEGG AAYGELTRSF TQIRQTDLAS FLEPGEVLPN DGVMDAYPLF
QRAVDAVTAQ GVPKTIAIPS GKYRIQSSVR WRTGSHVGFV GAGRENTRIL PEGSAVFGIM
DPSFDDTTTL NGLHFADFTI DCSGQTGPMD QVGIKGIALR WLVDSRFDRV RILNSWATSF
GCDFLRNVTF ADCTAIGSGR GAISRHSFGA GFGIGTGAFE NETVRFESCY AEGARSSGFF
VENLISTPNG VRGEGAGFIM TGCVAVGNWN GLRDFGAESS VITGCQFIDN ENAGISIDGG
SQAGRHGGRN NLATGNIIRG NSVGVLVGDA AVGSYTFADN EIVGNTLAGC RVTGRIGEGW
IWQGNRISQN GAGGIEILSP LISLPQITNN VIRENGTGDG ISMVGDTVEP VINGNTISGH
RGAGIRLPGE SSFMTTPTIR NNNTSENSLG SLVNEKVTDD TAHIAGNRAG ASFSTLTNLN
PRPSFQDGSI GPVTVITRFE APVPLLDEER GYVRLIAMGN SPTARVMRVN AALSGPLTVS
AWVRATRDTR IRAAVSGRWA AGTQSRNWQQ GGVEATGDWQ RVHVTFVLPA NGSGADLTLS
IDNTEAGGVL DVRDILLTPG VTLWGYFDGD SVGAEWTGAA YESTSVLTLS EVPISLEDRL
FSLTGQVPLV EKVGSGTTGG LTETAAQPLT MYAVFASAPS GVRARLRSAV NPATDRFAIG
RNGAGNAWVA VATDTTEATK FAAVNMVAGP AVIAGVREET IITVDVHGES SNSIEVDGFN
AVPLANINND ASVVHSLVYL GAHEAGVRSA VMDALAAEYG IA