Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2322 |
Symbol | |
ID | 8381478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 2488158 |
End bp | 2490806 |
Gene Length | 2649 bp |
Protein Length | 882 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645005085 |
Product | hypothetical protein |
Protein accession | YP_003162260 |
Protein GI | 256833533 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.219432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATTA CACCTTTCCC GACACAGGGC CAATACCCTT GGTACGACCA ACTTGAACAG TGGGGCGCGG ACACACAAGC CGCCGCCGAA TCCGCTGAAC TAAACGCGGA TGCTTTACGA GCAGACGTAG CAACCGCACT CAGCGACTCA ACCGCCGCGA GTGCCGCCGC CATTGCTGCT GCAGGTCTCG TGGGTGCGCC TGCTGGGGAG GCTGTGCTCG CGGCCGTCTC AGAAGGAGGG GCCGCCTATG GTGAGTTGAC CCGCTCGTTT ACGCAAATCC GGCAAACGGA CTTAGCTTCA TTCCTTGAGC CCGGCGAAGT GCTACCTAAC GATGGTGTAA TGGATGCGTA TCCGCTGTTT CAGCGCGCGG TTGACGCAGT CACCGCGCAA GGGGTTCCTA AGACGATCGC TATCCCCAGC GGGAAATACC GCATACAGTC CTCGGTGCGG TGGCGCACCG GGTCTCATGT CGGATTTGTG GGGGCGGGTC GGGAAAATAC GCGAATCCTT CCAGAAGGAT CAGCCGTATT TGGGATCATG GACCCGAGCT TCGATGACAC TACAACGCTC AATGGCCTCC ATTTCGCGGA TTTCACCATC GATTGCAGTG GCCAGACCGG CCCTATGGAT CAGGTGGGCA TTAAGGGGAT CGCCCTGCGT TGGCTTGTCG ATTCCCGTTT TGACCGGGTG CGAATCTTAA ACTCATGGGC GACCTCATTC GGGTGCGACT TCCTCCGCAA CGTCACCTTC GCGGACTGCA CGGCGATCGG CTCTGGTCGC GGCGCGATCA GCAGGCATTC GTTCGGTGCC GGATTCGGGA TCGGAACCGG CGCGTTCGAG AATGAGACTG TCCGTTTCGA GTCCTGCTAT GCGGAGGGCG CGCGTTCGTC CGGGTTCTTC GTCGAAAACC TCATCAGCAC CCCTAACGGT GTGCGCGGCG AGGGGGCTGG GTTCATCATG ACCGGCTGTG TTGCTGTCGG CAACTGGAAC GGGCTGCGCG ATTTCGGCGC AGAGTCGTCC GTGATTACCG GGTGCCAGTT CATTGATAAC GAGAACGCTG GAATCAGCAT CGACGGTGGC TCCCAGGCTG GCAGGCACGG AGGTCGCAAC AACCTCGCGA CGGGCAACAT TATCCGTGGC AACAGCGTCG GTGTGCTTGT CGGTGACGCC GCAGTGGGTT CTTACACGTT TGCGGATAAC GAAATTGTGG GAAACACTCT CGCAGGATGT CGAGTTACCG GTCGGATCGG TGAAGGGTGG ATCTGGCAGG GCAACCGTAT CAGCCAGAAC GGCGCGGGAG GGATCGAGAT CCTTTCTCCC CTAATTTCCC TCCCACAGAT CACAAACAAC GTGATCCGAG AGAACGGGAC CGGAGACGGC ATATCAATGG TTGGTGACAC TGTGGAACCG GTTATCAACG GGAACACGAT CTCAGGCCAT CGCGGCGCTG GTATACGCCT TCCTGGTGAG TCATCGTTCA TGACCACGCC AACGATACGC AACAACAACA CCTCGGAGAA CTCGCTGGGC AGCCTGGTGA ACGAGAAGGT CACGGATGAT ACTGCGCATA TCGCAGGGAA CCGGGCAGGA GCATCCTTCT CGACGCTCAC CAACCTCAAT CCGCGTCCGT CGTTCCAGGA CGGCTCGATT GGGCCGGTAA CCGTGATCAC GCGTTTCGAG GCTCCCGTGC CGCTGTTGGA CGAGGAACGC GGATACGTTC GTCTCATCGC AATGGGGAAC TCTCCGACTG CTCGTGTGAT GCGCGTGAAC GCTGCACTGT CCGGGCCGCT GACCGTCTCC GCATGGGTTC GCGCCACCAG AGATACCCGC ATCCGTGCGG CCGTCTCTGG GAGGTGGGCA GCGGGCACGC AAAGCCGCAA CTGGCAGCAG GGCGGCGTGG AGGCCACGGG GGATTGGCAG CGCGTCCATG TGACGTTCGT GCTTCCAGCC AACGGGTCTG GGGCTGACTT GACTCTTTCC ATCGACAACA CCGAAGCGGG AGGCGTGCTC GATGTGCGTG ACATCCTGCT GACCCCCGGC GTGACCCTCT GGGGCTACTT CGACGGAGAC TCAGTCGGTG CCGAATGGAC CGGCGCAGCA TACGAATCTA CGTCGGTGCT CACTCTTTCG GAAGTGCCAA TCAGTCTTGA AGATCGGCTC TTTTCGCTTA CTGGGCAAGT GCCGCTAGTA GAAAAAGTAG GGTCTGGCAC CACGGGAGGT CTGACTGAAA CAGCTGCTCA GCCACTAACG ATGTACGCGG TCTTTGCGTC TGCCCCGTCA GGGGTCCGTG CCCGCTTGCG TAGTGCAGTA AACCCCGCTA CTGACCGGTT CGCCATAGGT AGGAATGGCG CTGGCAACGC GTGGGTGGCC GTCGCGACAG ACACCACCGA GGCCACAAAA TTTGCGGCAG TAAACATGGT GGCAGGCCCC GCAGTTATTG CAGGGGTCCG CGAGGAAACC ATTATCACCG TTGACGTTCA CGGGGAGTCA TCTAACTCGA TTGAGGTCGA TGGATTCAAT GCAGTTCCTT TGGCGAACAT AAATAATGAC GCCTCGGTAG TGCACTCGCT CGTTTACTTG GGGGCGCATG AAGCGGGGGT CCGGTCCGCT GTGATGGACG CCCTGGCCGC TGAGTATGGC ATCGCTTAA
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Protein sequence | MSITPFPTQG QYPWYDQLEQ WGADTQAAAE SAELNADALR ADVATALSDS TAASAAAIAA AGLVGAPAGE AVLAAVSEGG AAYGELTRSF TQIRQTDLAS FLEPGEVLPN DGVMDAYPLF QRAVDAVTAQ GVPKTIAIPS GKYRIQSSVR WRTGSHVGFV GAGRENTRIL PEGSAVFGIM DPSFDDTTTL NGLHFADFTI DCSGQTGPMD QVGIKGIALR WLVDSRFDRV RILNSWATSF GCDFLRNVTF ADCTAIGSGR GAISRHSFGA GFGIGTGAFE NETVRFESCY AEGARSSGFF VENLISTPNG VRGEGAGFIM TGCVAVGNWN GLRDFGAESS VITGCQFIDN ENAGISIDGG SQAGRHGGRN NLATGNIIRG NSVGVLVGDA AVGSYTFADN EIVGNTLAGC RVTGRIGEGW IWQGNRISQN GAGGIEILSP LISLPQITNN VIRENGTGDG ISMVGDTVEP VINGNTISGH RGAGIRLPGE SSFMTTPTIR NNNTSENSLG SLVNEKVTDD TAHIAGNRAG ASFSTLTNLN PRPSFQDGSI GPVTVITRFE APVPLLDEER GYVRLIAMGN SPTARVMRVN AALSGPLTVS AWVRATRDTR IRAAVSGRWA AGTQSRNWQQ GGVEATGDWQ RVHVTFVLPA NGSGADLTLS IDNTEAGGVL DVRDILLTPG VTLWGYFDGD SVGAEWTGAA YESTSVLTLS EVPISLEDRL FSLTGQVPLV EKVGSGTTGG LTETAAQPLT MYAVFASAPS GVRARLRSAV NPATDRFAIG RNGAGNAWVA VATDTTEATK FAAVNMVAGP AVIAGVREET IITVDVHGES SNSIEVDGFN AVPLANINND ASVVHSLVYL GAHEAGVRSA VMDALAAEYG IA
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